RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	NUP49	Q02199	472 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	HPT1	Q04178	221 aa	Known RBP	3.4	□□□□□ -1.87
RPN5	YDL147W	YOL014W	Q08110	124 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	YML100W-A	Q8TGT0	57 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	KDX1	P36005	433 aa		3.39	□□□□□ -1.87
RPN5	YDL147W	SVP26	P38869	228 aa		3.39	□□□□□ -1.87
RPN5	YDL147W	CYT2	Q00873	224 aa		3.39	□□□□□ -1.87
RPN5	YDL147W	YER121W	P40076	114 aa		3.38	□□□□□ -1.87
RPN5	YDL147W	DAN1	P47178	298 aa		3.38	□□□□□ -1.87
RPN5	YDL147W	BOL2	P53082	120 aa		3.38	□□□□□ -1.87
RPN5	YDL147W	YOR342C	Q12182	319 aa		3.38	□□□□□ -1.87
RPN5	YDL147W	ARO7	P32178	256 aa		3.37	□□□□□ -1.87
RPN5	YDL147W	YKL102C	P34249	101 aa		3.37	□□□□□ -1.87
RPN5	YDL147W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
RPN5	YDL147W	AGE2	P40529	298 aa		3.37	□□□□□ -1.87
RPN5	YDL147W	YNR077C	P53758	84 aa		3.37	□□□□□ -1.87
RPN5	YDL147W	GPI17	Q04080	534 aa		3.37	□□□□□ -1.87
RPN5	YDL147W	CMD1	P06787	147 aa	Known RBP	3.36	□□□□□ -1.87
RPN5	YDL147W	TVP38	P36164	337 aa		3.36	□□□□□ -1.87
RPN5	YDL147W	AME1	P38313	324 aa		3.36	□□□□□ -1.87
RPN5	YDL147W	EFM5	P53200	248 aa	Known RBP	3.36	□□□□□ -1.87
RPN5	YDL147W	YAR023C	D6VPM8	179 aa		3.35	□□□□□ -1.87
RPN5	YDL147W	POR1	P04840	283 aa	Known RBP	3.35	□□□□□ -1.87
RPN5	YDL147W	FMP23	P38231	175 aa		3.35	□□□□□ -1.87
RPN5	YDL147W	YBR209W	P38311	105 aa		3.35	□□□□□ -1.87
RPN5	YDL147W	FCY21	P40039	528 aa		3.35	□□□□□ -1.87
RPN5	YDL147W	YMR099C	Q03161	297 aa	Known RBP	3.35	□□□□□ -1.87
RPN5	YDL147W	ATG40	Q99325	256 aa		3.35	□□□□□ -1.87
RPN5	YDL147W	DSE2	P38844	325 aa		3.34	□□□□□ -1.87
RPN5	YDL147W	MTW1	P39731	289 aa		3.34	□□□□□ -1.87
RPN5	YDL147W	VTC1	P40046	129 aa	RIP-Chip data	3.34	□□□□□ -1.87	not detected
RPN5	YDL147W	GPI14	P47088	403 aa	Known RBP	3.34	□□□□□ -1.87
RPN5	YDL147W	SAY1	P53324	424 aa		3.34	□□□□□ -1.87
RPN5	YDL147W	YMR295C	Q03559	197 aa		3.34	□□□□□ -1.87
RPN5	YDL147W	RAS2	P01120	322 aa	Known RBP	3.33	□□□□□ -1.88
RPN5	YDL147W	DDI2	P0CH63	225 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	DDI3	P0CH64	225 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	NRG2	P38082	220 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	NSG1	P38837	291 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	YJL027C	P47063	138 aa	Predicted RBP	3.33	□□□□□ -1.88
RPN5	YDL147W	VPS71	Q03433	280 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	BOL1	Q3E793	110 aa		3.33	□□□□□ -1.88
RPN5	YDL147W	MET5	P47169	1442 aa		3.32	□□□□□ -1.88
RPN5	YDL147W	FZF1	P32805	299 aa		3.32	□□□□□ -1.88
RPN5	YDL147W	TVP23	P38962	199 aa		3.32	□□□□□ -1.88
RPN5	YDL147W	YLR053C	Q12026	108 aa		3.32	□□□□□ -1.88
RPN5	YDL147W	NSP1	P14907	823 aa	Known RBP	3.31	□□□□□ -1.88
RPN5	YDL147W	RFC2	P40348	353 aa		3.31	□□□□□ -1.88
RPN5	YDL147W	YLR412C-A	Q3E742	68 aa		3.31	□□□□□ -1.88
RPN5	YDL147W	PDR18	P53756	1333 aa		3.31	□□□□□ -1.88
RPN5	YDL147W	MDH2	P22133	377 aa		3.3	□□□□□ -1.88
RPN5	YDL147W	MAK3	Q03503	176 aa		3.3	□□□□□ -1.88
RPN5	YDL147W	SHH3	Q04487	196 aa		3.3	□□□□□ -1.88
RPN5	YDL147W	NAT3	Q06504	195 aa		3.3	□□□□□ -1.88
RPN5	YDL147W	YLR236C	A0A023PZG4	107 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	RPS28B	P0C0X0	67 aa	Known RBP	3.29	□□□□□ -1.88
RPN5	YDL147W	TFC1	P32367	649 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	GAA1	P39012	614 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	YFL019C	P43576	117 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	YGL235W	P53071	178 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	BUD25	P85052	153 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	TMA20	P89886	181 aa	Predicted RBP	3.29	□□□□□ -1.88
RPN5	YDL147W	SML1	Q04964	104 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	YHR086W-A	Q3E746	53 aa		3.29	□□□□□ -1.88
RPN5	YDL147W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.29	□□□□□ -1.88
RPN5	YDL147W	CUP9	P41817	306 aa		3.28	□□□□□ -1.88
RPN5	YDL147W	YFH7	P43591	353 aa		3.28	□□□□□ -1.88
RPN5	YDL147W	MPC3	P53311	146 aa		3.28	□□□□□ -1.88
RPN5	YDL147W	MPA43	P53583	542 aa	Predicted RBP	3.28	□□□□□ -1.88
RPN5	YDL147W	CUE4	Q04201	117 aa	Predicted RBP	3.28	□□□□□ -1.88
RPN5	YDL147W	DGK1	Q12382	290 aa		3.28	□□□□□ -1.88
RPN5	YDL147W	RDI1	Q12434	202 aa		3.28	□□□□□ -1.88
RPN5	YDL147W	SPO13	P23624	291 aa		3.27	□□□□□ -1.89
RPN5	YDL147W	PEP8	P40335	379 aa		3.27	□□□□□ -1.89
RPN5	YDL147W	AYR1	P40471	297 aa		3.27	□□□□□ -1.89
RPN5	YDL147W	FIG1	P38224	298 aa		3.26	□□□□□ -1.89
RPN5	YDL147W	ERJ5	P43613	295 aa	Predicted RBP	3.26	□□□□□ -1.89
RPN5	YDL147W	XPT1	P47165	209 aa		3.26	□□□□□ -1.89
RPN5	YDL147W	YDR476C	Q03362	224 aa		3.26	□□□□□ -1.89
RPN5	YDL147W	RAD28	Q12021	506 aa		3.26	□□□□□ -1.89
RPN5	YDL147W	TIR1	P10863	254 aa		3.25	□□□□□ -1.89
RPN5	YDL147W	UBC6	P33296	250 aa	Predicted RBP	3.25	□□□□□ -1.89
RPN5	YDL147W	DER1	P38307	211 aa		3.25	□□□□□ -1.89
RPN5	YDL147W	EDC3	P39998	551 aa	Known RBP	3.25	□□□□□ -1.89
RPN5	YDL147W	TIM13	P53299	105 aa		3.25	□□□□□ -1.89
RPN5	YDL147W	NSA2	P40078	261 aa	Known RBP	3.24	□□□□□ -1.89
RPN5	YDL147W	TTI2	P47168	421 aa		3.24	□□□□□ -1.89
RPN5	YDL147W	SBH1	P52870	82 aa		3.24	□□□□□ -1.89
RPN5	YDL147W	HSK3	P69852	69 aa		3.24	□□□□□ -1.89
RPN5	YDL147W	YDL180W	Q12301	547 aa		3.24	□□□□□ -1.89
RPN5	YDL147W	SPC25	P40014	221 aa		3.23	□□□□□ -1.89
RPN5	YDL147W	KNH1	P50112	268 aa		3.23	□□□□□ -1.89
RPN5	YDL147W	YMR253C	Q04835	414 aa		3.23	□□□□□ -1.89
RPN5	YDL147W	IRC23	Q08416	157 aa		3.23	□□□□□ -1.89
RPN5	YDL147W	NSL1	Q12143	216 aa		3.23	□□□□□ -1.89
RPN5	YDL147W	SBH2	P52871	88 aa		3.22	□□□□□ -1.89
RPN5	YDL147W	POP3	P53833	195 aa	Predicted RBP	3.22	□□□□□ -1.89
RPN5	YDL147W	DIG2	Q03373	323 aa	Known RBP	3.22	□□□□□ -1.89
RPN5	YDL147W	ANT1	Q06497	328 aa		3.22	□□□□□ -1.89
RPN5	YDL147W	FAS1	P07149	2051 aa	Known RBP	3.22	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms