RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C NPY1P53164 384 aa0.95□□□□□ -2.26
VAM6YDL077C GEP7P53171 287 aa0.95□□□□□ -2.26
VAM6YDL077C YGR039WP53225 103 aa0.95□□□□□ -2.26
VAM6YDL077C SCW4P53334 386 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C RSM19P53733 91 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C YNL260CP53846 198 aa0.95□□□□□ -2.26
VAM6YDL077C ERG13P54839 491 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C CCE1Q03702 353 aa0.95□□□□□ -2.26
VAM6YDL077C UPS3Q04006 179 aa0.95□□□□□ -2.26
VAM6YDL077C YDR391CQ04170 232 aa0.95□□□□□ -2.26
VAM6YDL077C RIM9Q04734 239 aa0.95□□□□□ -2.26
VAM6YDL077C ELP6Q04868 273 aa0.95□□□□□ -2.26
VAM6YDL077C HRI1Q05905 244 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C XYL2Q07993 356 aa0.95□□□□□ -2.26
VAM6YDL077C YOR378WQ08902 515 aa0.95□□□□□ -2.26
VAM6YDL077C YDL180WQ12301 547 aa0.95□□□□□ -2.26
VAM6YDL077C PRP46Q12417 451 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C RDI1Q12434 202 aa0.95□□□□□ -2.26
VAM6YDL077C HTL1Q9URQ5 78 aa0.95□□□□□ -2.26
VAM6YDL077C STE7P06784 515 aa0.95□□□□□ -2.26
VAM6YDL077C MRS1P07266 363 aa0.95□□□□□ -2.26
VAM6YDL077C PAU1P0CE88 120 aa0.95□□□□□ -2.26
VAM6YDL077C PAU14P0CE89 120 aa0.95□□□□□ -2.26
VAM6YDL077C PAU6P0CE90 120 aa0.95□□□□□ -2.26
VAM6YDL077C PAU18P0CE91 120 aa0.95□□□□□ -2.26
VAM6YDL077C PAU8P0CE92 120 aa0.95□□□□□ -2.26
VAM6YDL077C PAU11P0CE93 120 aa0.95□□□□□ -2.26
VAM6YDL077C SNF5P18480 905 aa0.95□□□□□ -2.26
VAM6YDL077C GPI12P23797 304 aa0.95□□□□□ -2.26
VAM6YDL077C PEX34P25584 144 aa0.95□□□□□ -2.26
VAM6YDL077C FEN2P25621 512 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C YMC1P32331 307 aa0.95□□□□□ -2.26
VAM6YDL077C DCG1P32460 244 aa0.95□□□□□ -2.26
VAM6YDL077C SPS18P32572 300 aa0.95□□□□□ -2.26
VAM6YDL077C ALK2P32789 676 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C TIM23P32897 222 aa0.95□□□□□ -2.26
VAM6YDL077C PRP18P33411 251 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C TOM6P33448 61 aa0.95□□□□□ -2.26
VAM6YDL077C MRPS5P33759 307 aa0.95□□□□□ -2.26
VAM6YDL077C MTH1P35198 433 aa0.95□□□□□ -2.26
VAM6YDL077C NTC20P38302 140 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C RPS20P38701 121 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C PAU13P38725 120 aa0.95□□□□□ -2.26
VAM6YDL077C CTF8P38877 133 aa0.95□□□□□ -2.26
VAM6YDL077C BAT1P38891 393 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C CDC40P40968 455 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C SNO3P43544 222 aa0.95□□□□□ -2.26
VAM6YDL077C YFR020WP43600 232 aa0.95□□□□□ -2.26
VAM6YDL077C RPA43P46669 326 aa0.95□□□□□ -2.26
VAM6YDL077C DUO1P53168 247 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C YGR045CP53229 120 aa0.95□□□□□ -2.26
VAM6YDL077C CRH1P53301 507 aa0.95□□□□□ -2.26
VAM6YDL077C TEX1P53851 422 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C DUG3P53871 357 aa0.95□□□□□ -2.26
VAM6YDL077C AQR1P53943 586 aa0.95□□□□□ -2.26
VAM6YDL077C PAU10Q03050 120 aa0.95□□□□□ -2.26
VAM6YDL077C YDR209CQ03480 137 aa0.95□□□□□ -2.26
VAM6YDL077C GRH1Q04410 372 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C HLR1Q04429 423 aa0.95□□□□□ -2.26
VAM6YDL077C ECM18Q04623 453 aa0.95□□□□□ -2.26
VAM6YDL077C RSF1Q05043 376 aa0.95□□□□□ -2.26
VAM6YDL077C HRD3Q05787 833 aa0.95□□□□□ -2.26
VAM6YDL077C ARR3Q06598 404 aa0.95□□□□□ -2.26
VAM6YDL077C OPI10Q08202 246 aa0.95□□□□□ -2.26
VAM6YDL077C PAU20Q08322 120 aa0.95□□□□□ -2.26
VAM6YDL077C TMS1Q12116 473 aa0.95□□□□□ -2.26
VAM6YDL077C FCY22Q12119 530 aa0.95□□□□□ -2.26
VAM6YDL077C RKI1Q12189 258 aa0.95□□□□□ -2.26
VAM6YDL077C RFM1Q12192 310 aa0.95□□□□□ -2.26
VAM6YDL077C PAU9Q3E770 120 aa0.95□□□□□ -2.26
VAM6YDL077C COA3Q3E7B2 85 aa0.95□□□□□ -2.26
VAM6YDL077C TFB5Q3E7C1 72 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C STT4P37297 1900 aa0.95□□□□□ -2.26
VAM6YDL077C YPT1P01123 206 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C RPL28P02406 149 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C RPL7AP05737 244 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C CDC21P06785 304 aa0.94□□□□□ -2.26
VAM6YDL077C RPS16AP0CX51 143 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C RPS16BP0CX52 143 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C CUP2P15315 225 aa0.94□□□□□ -2.26
VAM6YDL077C SPO13P23624 291 aa0.94□□□□□ -2.26
VAM6YDL077C RFA3P26755 122 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C TIP1P27654 210 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C FUN19P28003 413 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C FPR2P32472 135 aa0.94□□□□□ -2.26
VAM6YDL077C MSN2P33748 704 aa0.94□□□□□ -2.26
VAM6YDL077C NRG2P38082 220 aa0.94□□□□□ -2.26
VAM6YDL077C PTH1P38876 190 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C TEM1P38987 245 aa0.94□□□□□ -2.26
VAM6YDL077C YPL073CP40323 161 aa0.94□□□□□ -2.26
VAM6YDL077C AIM19P40502 157 aa0.94□□□□□ -2.26
VAM6YDL077C HAC1P41546 238 aa0.94□□□□□ -2.26
VAM6YDL077C YFR045WP43617 309 aa0.94□□□□□ -2.26
VAM6YDL077C YGR149WP48236 432 aa0.94□□□□□ -2.26
VAM6YDL077C CDH1P53197 566 aa0.94□□□□□ -2.26
VAM6YDL077C YGR250CP53316 781 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C YML122CQ03207 126 aa0.94□□□□□ -2.26
VAM6YDL077C ADD37Q03233 198 aa0.94□□□□□ -2.26
VAM6YDL077C BET5Q03630 159 aa0.94□□□□□ -2.26
VAM6YDL077C CAB5Q03941 241 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms