RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CD97P48960 835 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 TMPRSS15P98073 1019 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 TOP3AQ13472 1001 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-227ENST00000640648 RPS6KA2Q15349 733 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 PFKFB3Q16875 520 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-227ENST00000640648 ZNF618Q5T7W0 954 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 TWF2Q6IBS0 349 aaKnown RBP8.66□□□□□ -1.02
NECAP1-227ENST00000640648 FAM47EQ6ZV65 393 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 ERP44Q9BS26 406 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
NECAP1-227ENST00000640648 RAB26Q9ULW5 256 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 UBE2Q2LH0YL09 131 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 TM9SF1O15321 606 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 DLGAP3O95886 979 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 ASLP04424 464 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 EIF4BP23588 611 aaKnown RBP8.66□□□□□ -1.02
NECAP1-227ENST00000640648 KRT20P35900 424 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 TYSND1Q2T9J0 566 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 ASPRV1Q53RT3 343 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 PDIK1LQ8N165 341 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 ZNF555Q8NEP9 628 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 GINS4Q9BRT9 223 aa8.66□□□□□ -1.02
NECAP1-227ENST00000640648 MYO3AQ8NEV4 1616 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 LDHAP00338 332 aaKnown RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 PLS3P13797 630 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 ITGAXP20702 1163 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 GPD2P43304 727 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 PRIM2P49643 509 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 AASDHQ4L235 1098 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 AMNQ9BXJ7 453 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 GCOM2Q9BZD3 368 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 C1orf112Q9NSG2 853 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 SLC26A4O43511 780 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 UQCRBP14927 111 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 PSMC2P35998 433 aaKnown RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 GJA9P57773 515 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 HPCAP84074 193 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 NR1D2Q14995 579 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 MTFR1Q15390 333 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 RINT1Q6NUQ1 792 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 OTULINQ96BN8 352 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 RTFDC1Q9BY42 306 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 DDX47Q9H0S4 455 aaKnown RBP8.65□□□□□ -1.02
NECAP1-227ENST00000640648 CDH19Q9H159 772 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 TRABDQ9H4I3 376 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 KIF17Q9P2E2 1029 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 ZHX2Q9Y6X8 837 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.02
NECAP1-227ENST00000640648 FARP2O94887 1054 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 CHEK2O96017 543 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 POLR2MP0CAP2 368 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 PYGMP11217 842 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 HOXB6P17509 224 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 GAP43P17677 238 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 ACAT1P24752 427 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SOX6P35712 828 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 IST1P53990 364 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 CSE1LP55060 971 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SNAP25P60880 206 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 BNIP1Q12981 228 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 HADHQ16836 314 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 CCSAPQ6IQ19 270 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 NLRX1Q86UT6 975 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 TRIM39Q9HCM9 518 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SNX24Q9Y343 169 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 CPS1P31327 1500 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 PALLDQ8WX93 1383 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 NCAPD2Q15021 1401 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 ARHGEF37A1IGU5 675 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 TOM1O60784 492 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 GDF11O95390 407 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 ACSL3O95573 720 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 TNNC2P02585 160 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SRGNP10124 158 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 MYL4P12829 197 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 IL32P24001 234 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 TMC4Q7Z404 712 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 GIMAP8Q8ND71 665 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 JDP2Q8WYK2 163 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 PREBQ9HCU5 417 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SCN3BQ9NY72 215 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 SERPINB13Q9UIV8 391 aa8.65□□□□□ -1.03
NECAP1-227ENST00000640648 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.03
NECAP1-227ENST00000640648 A6NHS1 94 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TBC1D4O60343 1298 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 LYNP07948 512 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CDK8P49336 464 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 COPAP53621 1224 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PRKG1Q13976 671 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CLEC4GQ6UXB4 293 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 DGKHQ86XP1 1220 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SNX31Q8N9S9 440 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms