RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 TMEM59LQ9UK28 342 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 PCDHGC3Q9UN70 934 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 NOC2LQ9Y3T9 749 aaKnown RBP13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 HES2Q9Y543 173 aa13.05□□□□□ -0.32
CACNA1D-228ENST00000638120 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ERLIN1O75477 346 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ELNP15502 786 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 COMTP21964 271 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CST5P28325 142 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 RAD23BP54727 409 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 GDF6Q6KF10 455 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CD101Q93033 1021 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 BTBD6Q96KE9 485 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ZMAT2Q96NC0 199 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 SRRDQ9UH36 339 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 M0QZ92 97 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CILPO75339 1184 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 SEC31AO94979 1220 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 MMP8P22894 467 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CDH8P55286 799 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 GLE1Q53GS7 698 aaKnown RBP13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 SERINC5Q86VE9 423 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 UBL4BQ8N7F7 174 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 ALG3Q92685 438 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 TRPV2Q9Y5S1 764 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 CDY2AQ9Y6F7 541 aa13.04□□□□□ -0.32
CACNA1D-228ENST00000638120 MED7O43513 233 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 SPOPO43791 374 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 HMGCRP04035 888 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 RPLP2P05387 115 aaKnown RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 ASGR1P07306 291 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 CTNNA2P26232 953 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 CTNNA1P35221 906 aaKnown RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 TNNC1P63316 161 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 FAM47CQ5HY64 1035 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 PLEKHA7Q6IQ23 1121 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 KRT35Q92764 455 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 MRPL47Q9HD33 250 aaKnown RBP13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 CEP83Q9Y592 693 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
CACNA1D-228ENST00000638120 CCDC66A2RUB6 948 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 ATP8B1O43520 1251 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 CD19P15391 556 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 AKAP5P24588 427 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 HOXD10P28358 340 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 MARCKSL1P49006 195 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 PEX5P50542 639 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 PTPN11Q06124 597 aaPredicted RBP13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 MYO1EQ12965 1108 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 KCNA10Q16322 511 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 XKR4Q5GH76 650 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 BEND6Q5SZJ8 279 aaPredicted RBP13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 LRRC52Q8N7C0 313 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 WNT8BQ93098 351 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 TWNKQ96RR1 684 aa13.02□□□□□ -0.32
CACNA1D-228ENST00000638120 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms