RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 WDTC1Q8N5D0 677 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 ACTRT1Q8TDG2 376 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 SELENOOQ9BVL4 669 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 TRIM6Q9C030 488 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 UVRAGQ9P2Y5 699 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 TUBGCP4Q9UGJ1 667 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 DMGDHQ9UI17 866 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 ITGA11Q9UKX5 1188 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
CACNA1A-231ENST00000636816 GRIN2DO15399 1336 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 RECQL4O94761 1208 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 GJB6O95452 261 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 ATICP31939 592 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 RBP5P82980 135 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 BRD3Q15059 726 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 ZBTB6Q15916 424 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 FAM228AQ86W67 206 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 PHF13Q86YI8 300 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 CD302Q8IX05 232 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 AP1M1Q9BXS5 423 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 OSBPL7Q9BZF2 842 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 PLEKHA5Q9HAU0 1116 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 CDY2AQ9Y6F7 541 aa16.9■□□□□ 0.3
CACNA1A-231ENST00000636816 CCDC151A5D8V7 595 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 AXLP30530 894 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 NKX3-2P78367 333 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 MRPS6P82932 125 aaKnown RBP16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 PCBP1Q15365 356 aaKnown RBP eCLIP16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 KCTD19Q17RG1 926 aaPredicted RBP16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 WDR93Q6P2C0 686 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 C1orf131Q8NDD1 294 aaKnown RBP16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 KLHDC9Q8NEP7 349 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 VRTNQ9H8Y1 702 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 AVENQ9NQS1 362 aaPredicted RBP16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 ANAPC7Q9UJX3 599 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.3
CACNA1A-231ENST00000636816 HTTP42858 3142 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 CTSHP09668 335 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 CD19P15391 556 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 CCSAPQ6IQ19 270 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 SLC4A11Q8NBS3 891 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 CD101Q93033 1021 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 KRT12Q99456 494 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
CACNA1A-231ENST00000636816 PDCD11Q14690 1871 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CHRNA1P02708 482 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 ITGA4P13612 1032 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 PEX5P50542 639 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 HOMEZQ8IX15 550 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 KLHL7Q8IXQ5 586 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 ARRDC4Q8NCT1 418 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 ARFGAP3Q9NP61 516 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 PARP2Q9UGN5 583 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 NR2E1Q9Y466 385 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 PGRMC1O00264 195 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CILPO75339 1184 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 MYBL1P10243 752 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 MYBL2P10244 700 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 MAMLD1Q13495 774 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 BEND6Q5SZJ8 279 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 DAB2IPQ5VWQ8 1189 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 ADAT2Q7Z6V5 191 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CNTN3Q9P232 1028 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 CYTH4Q9UIA0 394 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 DERAQ9Y315 318 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 IPPQ9Y573 584 aa16.88■□□□□ 0.29
CACNA1A-231ENST00000636816 SASH3O75995 380 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 FGGP02679 453 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 MMP8P22894 467 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 HTRA3P83110 453 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 SERINC5Q86VE9 423 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 GSPT2Q8IYD1 628 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 TRIM11Q96F44 468 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 VCPIP1Q96JH7 1222 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 TRPV2Q9Y5S1 764 aa16.87■□□□□ 0.29
CACNA1A-231ENST00000636816 SMIM28A0A1B0GU29 152 aa16.86■□□□□ 0.29
CACNA1A-231ENST00000636816 SPOPO43791 374 aa16.86■□□□□ 0.29
CACNA1A-231ENST00000636816 NDST1P52848 882 aa16.86■□□□□ 0.29
CACNA1A-231ENST00000636816 TNNC1P63316 161 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms