RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PRDM4Q9UKN5 801 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 NENFQ9UMX5 172 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PCDHB4Q9Y5E5 795 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 ZNF623O75123 536 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CALCAP01258 141 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 WEE2P0C1S8 567 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 COL6A1P12109 1028 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CD58P19256 250 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PAPD7Q5XG87 772 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 AGMOQ6ZNB7 445 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 MRPL10Q7Z7H8 261 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 DNAAF5Q86Y56 855 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 GSTCDQ8NEC7 633 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 TSPAN18Q96SJ8 248 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 BCO2Q9BYV7 579 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 GOLGA2P5Q9HBQ8 144 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CISHQ9NSE2 258 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 FAM53CQ9NYF3 392 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CNTN6Q9UQ52 1028 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CAPN6Q9Y6Q1 641 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 NBNO60934 754 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 TACC1O75410 805 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 TNFAIP3P21580 790 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 IBSPP21815 317 aaPredicted RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 RAP1GAPP47736 663 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 AFF1P51825 1210 aaKnown RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 SOX4Q06945 474 aaPredicted RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 TRIM60Q495X7 471 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 TAF3Q5VWG9 929 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 NOA1Q8NC60 698 aaKnown RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 RBBP8NLQ8NC74 664 aaPredicted RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 PPP1R10Q96QC0 940 aaKnown RBP14.12□□□□□ -0.15
VRK3-205ENST00000593919 GAD1Q99259 594 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 PACSIN1Q9BY11 444 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
VRK3-205ENST00000593919 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 ARL5CA6NH57 179 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 STAU1O95793 577 aaKnown RBP14.11□□□□□ -0.15
VRK3-205ENST00000593919 MMEP08473 750 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 CHRNB2P17787 502 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 FMO1Q01740 532 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 FAAP100Q0VG06 881 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 GPNMBQ14956 572 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 NAB2Q15742 525 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 C9orf57Q5W0N0 161 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 TRIM58Q8NG06 486 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 LINC01599Q8WXQ3 324 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 DDX1Q92499 740 aaKnown RBP14.11□□□□□ -0.15
VRK3-205ENST00000593919 FAXDC2Q96IV6 333 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 RPS6KC1Q96S38 1066 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 PNKPQ96T60 521 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 SMYD3Q9H7B4 428 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 LUC7LQ9NQ29 371 aaKnown RBP14.11□□□□□ -0.15
VRK3-205ENST00000593919 DCDC2CA8MYV0 355 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 ZNF132P52740 706 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 TLE2Q04725 743 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 RTN4RL1Q86UN2 441 aaPredicted RBP14.11□□□□□ -0.15
VRK3-205ENST00000593919 LRRC52Q8N7C0 313 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 ANKLE1Q8NAG6 615 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 MSANTD4Q8NCY6 345 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 SDCBP2Q9H190 292 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 HIPK3Q9H422 1215 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 ARFGAP3Q9NP61 516 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 RGS18Q9NS28 235 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 TAS2R14Q9NYV8 317 aa14.11□□□□□ -0.15
VRK3-205ENST00000593919 TTC3P53804 2025 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 MICAL3Q7RTP6 2002 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 LAMA2P24043 3122 aaKnown RBP14.1□□□□□ -0.15
VRK3-205ENST00000593919 FAM170AA1A519 330 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 TMCO5BA8MYB1 307 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 ZNF185O15231 689 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 PJA2O43164 708 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 SKIP12755 728 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 P4HA1P13674 534 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 CYP3A5P20815 502 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 GNA15P30679 374 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 SCNN1GP51170 649 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 CDH8P55286 799 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 BPIFB4P59827 614 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 TNNC1P63316 161 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 TUBB4BP68371 445 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 CDR2Q01850 454 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 ZNF394Q53GI3 561 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 C10orf76Q5T2E6 689 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 ZNF598Q86UK7 904 aaKnown RBP14.1□□□□□ -0.15
VRK3-205ENST00000593919 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 PCDHB18PQ96TA0 734 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms