RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 C11orf49Q9H6J7 331 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 CDC23Q9UJX2 597 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 PODXLO00592 558 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 FGBP02675 491 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 MLH1P40692 756 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 LBX1P52954 281 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 SNX1Q13596 522 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 IL17AQ16552 155 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 JADE1Q6IE81 842 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 C4orf32Q8N8J7 132 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 DNAAF3Q8N9W5 541 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 SLC30A5Q8TAD4 765 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 RIN2Q8WYP3 895 aaPredicted RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 CYFIP2Q96F07 1278 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 SYT15Q9BQS2 421 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 DPH5Q9H2P9 285 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 PLEKHA4Q9H4M7 779 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 LMCD1Q9NZU5 365 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 MAD1L1Q9Y6D9 718 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 GJB1P08034 283 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 RAD51Q06609 339 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 TJP1Q07157 1748 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 APBB2Q92870 758 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 ACO2Q99798 780 aaKnown RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 MMTAG2Q9BU76 263 aaKnown RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 TSPYL2Q9H2G4 693 aaPredicted RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 DDX43Q9NXZ2 648 aaKnown RBP10.39□□□□□ -0.75
LIG3-216ENST00000593099 UVRAGQ9P2Y5 699 aa10.39□□□□□ -0.75
LIG3-216ENST00000593099 FAM237AA0A1B0GTK4 181 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ADCY6O43306 1168 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 HMBSP08397 361 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ARHGAP1Q07960 439 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 SLC18A3Q16572 532 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 C10orf120Q5SQS8 335 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 TRIM59Q8IWR1 403 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PARD3BQ8TEW8 1205 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 DNAJC19Q96DA6 116 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 UROC1Q96N76 676 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 CYP4F11Q9HBI6 524 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 TRPM5Q9NZQ8 1165 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ANAPC5Q9UJX4 755 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 GABRQQ9UN88 632 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 GIT1Q9Y2X7 761 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 TIMM13Q9Y5L4 95 aaPredicted RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 MORC2Q9Y6X9 1032 aaPredicted RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 WNT7AO00755 349 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PALMO75781 387 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ECEL1O95672 775 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PAX3P23760 479 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PON1P27169 355 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PHBP35232 272 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PPM1AP35813 382 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 TLE2Q04725 743 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 PTK7Q13308 1070 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ARFGAP2Q8N6H7 521 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 CCHCR1Q8TD31 782 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 FBXO32Q969P5 355 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 AGPAT5Q9NUQ2 364 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 CHD4Q14839 1912 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 A0A1W2PQJ5 194 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 GTPBP10A4D1E9 387 aaKnown RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
LIG3-216ENST00000593099 TLL1O43897 1013 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 CTNNB1P35222 781 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 GCKP35557 465 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 BCAT1P54687 386 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 DEUP1Q05D60 604 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 ITIH5Q86UX2 942 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 SELENOSQ9BQE4 189 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 RSPH14Q9UHP6 348 aa10.38□□□□□ -0.75
LIG3-216ENST00000593099 KPNA7A9QM74 516 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 SARSP49591 514 aaKnown RBP10.37□□□□□ -0.75
LIG3-216ENST00000593099 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
LIG3-216ENST00000593099 PTPN11Q06124 597 aaPredicted RBP10.37□□□□□ -0.75
LIG3-216ENST00000593099 GJB7Q6PEY0 223 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 C17orf99Q6UX52 265 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 KRT222Q8N1A0 295 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.37□□□□□ -0.75
LIG3-216ENST00000593099 RNF25Q96BH1 459 aaPredicted RBP10.37□□□□□ -0.75
LIG3-216ENST00000593099 TTC1Q99614 292 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 TMEM117Q9H0C3 514 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 PTPN22Q9Y2R2 807 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 HES2Q9Y543 173 aa10.37□□□□□ -0.75
LIG3-216ENST00000593099 ARVCFO00192 962 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms