RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TIPINQ9BVW5 301 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 SLC13A4Q9UKG4 626 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 NPHP3-ACAD11A0A0J9YXS1 232 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 H0YIN7 160 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 M0QYV0 167 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.041e-8■□□□□ 9.3
SMARCA4-214ENST00000589677 PPIP5K2O43314 1243 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 EIF2B2P49770 351 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 BNC2Q6ZN30 1099 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CREG2Q8IUH2 290 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 KCTD17Q8N5Z5 321 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 TUBGCP3Q96CW5 907 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 EFCAB1Q9HAE3 211 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CAB39Q9Y376 341 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CRB1P82279 1406 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ATP5BP06576 529 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ITGB3BPQ13352 177 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CCDC85BQ15834 202 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 Q4G0T1 1027 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 GORASP1Q9BQQ3 440 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 NSMCE4AQ9NXX6 385 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 E9PCH4 1651 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 NRKQ7Z2Y5 1582 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 TRPC5OSA6NMA1 111 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 HLA-DPA1P20036 260 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 QARSP47897 775 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ATXN3P54252 364 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 OSTNP61366 133 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 NSUN2Q08J23 767 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CCDC80Q76M96 950 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 HAUS6Q7Z4H7 955 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF513Q8N8E2 541 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 CDC26Q8NHZ8 85 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ATAD3AQ9NVI7 634 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 KLHL11Q9NVR0 708 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 KCND2Q9NZV8 630 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ATP8B3O60423 1300 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 SAC3D1A6NKF1 404 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 TCP10L2B9ZVM9 353 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 H2AFYO75367 372 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 C16orf72Q14CZ0 275 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 SH3GL1Q99961 368 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 COPG1Q9Y678 874 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 NFIBO00712 420 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 PSMA4P25789 261 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.045e-7■■■□□ 19.1
SMARCA4-214ENST00000589677 EPHA7Q15375 998 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ANGPTL8Q6UXH0 198 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 FOXP4Q8IVH2 680 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 TRIM63Q969Q1 353 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 THAP2Q9H0W7 228 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 RUBCNLQ9H714 662 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ASAP1Q9ULH1 1129 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 EPHB2P29323 1055 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 SFNP31947 248 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 ERVK-9P63128 1117 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 KRT76Q01546 638 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 TMEM179Q6ZVK1 233 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 C1orf131Q8NDD1 294 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 CPA5Q8WXQ8 436 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 APBB2Q92870 758 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 MYLK2Q9H1R3 596 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 PSTPIP1O43586 416 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 GDF11O95390 407 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 RALAP11233 206 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 SARSP49591 514 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 PEX5P50542 639 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 GPC3P51654 580 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 PDAP1Q13442 181 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 DMC1Q14565 340 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 METTL23Q86XA0 190 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 STAP1Q9ULZ2 295 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 RPL26L1Q9UNX3 145 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 AKT3Q9Y243 479 aa15.28■□□□□ 0.04
SMARCA4-214ENST00000589677 TBX3O15119 743 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 ABL1P00519 1130 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 APOA4P06727 396 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 OCM2P0CE71 109 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 OCMP0CE72 109 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 SESN2P58004 480 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 SCARF1Q14162 830 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 GSTA3Q16772 222 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 CEP95Q96GE4 821 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 SEMA4AQ9H3S1 761 aa15.27■□□□□ 0.04
SMARCA4-214ENST00000589677 HSPBP1Q9NZL4 362 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms