RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 C15orf39Q6ZRI6 1047 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 PPFIBP1Q86W92 1011 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 MRPL43Q8N983 215 aaKnown RBP17.96■□□□□ 0.47
GCDH-203ENST00000585420 FBXL13Q8NEE6 735 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 NEK11Q8NG66 645 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 TAS1R2Q8TE23 839 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 CACTINQ8WUQ7 758 aaKnown RBP17.96■□□□□ 0.47
GCDH-203ENST00000585420 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 UROC1Q96N76 676 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 INTS2Q9H0H0 1204 aaKnown RBP17.96■□□□□ 0.47
GCDH-203ENST00000585420 C2CD2Q9Y426 696 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 C5orf42Q9H799 3197 aa17.96■□□□□ 0.47
GCDH-203ENST00000585420 C2orf71A6NGG8 1288 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 PODXLO00592 558 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 PTMAP06454 111 aaKnown RBP17.95■□□□□ 0.46
GCDH-203ENST00000585420 PIK3CAP42336 1068 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 NRIP1P48552 1158 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 SMC1AQ14683 1233 aaKnown RBP17.95■□□□□ 0.46
GCDH-203ENST00000585420 TRIM65Q6PJ69 517 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 DCLRE1AQ6PJP8 1040 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 TRAPPC11Q7Z392 1133 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 NT5DC4Q86YG4 428 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 IMPACTQ9P2X3 320 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 STK39Q9UEW8 545 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 UBQLN1Q9UMX0 589 aaKnown RBP17.95■□□□□ 0.46
GCDH-203ENST00000585420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.95■□□□□ 0.46
GCDH-203ENST00000585420 C2CD2LO14523 706 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 CLSTN1O94985 981 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 TPM1P09493 284 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 APBA1Q02410 837 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 TRIM14Q14142 442 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 EHBP1Q8NDI1 1231 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 CPLX3Q8WVH0 158 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
GCDH-203ENST00000585420 NUP58Q9BVL2 599 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 TLE6Q9H808 572 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.95■□□□□ 0.468e-7■■■■■ 298.1
GCDH-203ENST00000585420 CHST7Q9NS84 486 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 DERAQ9Y315 318 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 COQ4Q9Y3A0 265 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 IRAK3Q9Y616 596 aa17.95■□□□□ 0.46
GCDH-203ENST00000585420 SF3B1O75533 1304 aaKnown RBP eCLIP17.94■□□□□ 0.463e-6■■■■■ 137.9
GCDH-203ENST00000585420 MUC3AQ02505 3323 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 I3L4J1 428 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 GYPCP04921 128 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 CYP3A5P20815 502 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 RPL9P32969 192 aaKnown RBP17.94■□□□□ 0.46
GCDH-203ENST00000585420 BRCC3P46736 316 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 BMS1Q14692 1282 aaKnown RBP17.94■□□□□ 0.46
GCDH-203ENST00000585420 SEMA4DQ92854 862 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 PPP2R3CQ969Q6 453 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 TSPAN18Q96SJ8 248 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 HERC2P3Q9BVR0 1158 aa17.94■□□□□ 0.46
GCDH-203ENST00000585420 PDCD11Q14690 1871 aaKnown RBP17.94■□□□□ 0.46
GCDH-203ENST00000585420 EPHB6O15197 1021 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LINC01565O15544 149 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LILRB3O75022 631 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LRRN2O75325 713 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 VNN1O95497 513 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 HLA-DRAP01903 254 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 KRT19P08727 400 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LRPAP1P30533 357 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 RBM10P98175 930 aaKnown RBP17.93■□□□□ 0.46
GCDH-203ENST00000585420 DSG1Q02413 1049 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LRMPQ12912 555 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
GCDH-203ENST00000585420 TRPC3Q13507 836 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 NCOA4Q13772 614 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 USP41Q3LFD5 358 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 RTP2Q5QGT7 225 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 FAM171A1Q5VUB5 890 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 KIAA0319Q5VV43 1072 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 LMO3Q8TAP4 145 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 PLCB1Q9NQ66 1216 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 MRPL17Q9NRX2 175 aaKnown RBP17.93■□□□□ 0.46
GCDH-203ENST00000585420 ANK1P16157 1881 aa17.93■□□□□ 0.46
GCDH-203ENST00000585420 PPEF2O14830 753 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 XPOTO43592 962 aaKnown RBP17.92■□□□□ 0.46
GCDH-203ENST00000585420 URODP06132 367 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 CASP14P31944 242 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 FIGNQ5HY92 759 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 WDR44Q5JSH3 913 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 KLHDC7AQ5VTJ3 777 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 KIAA1841Q6NSI8 718 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 C1orf127Q8N9H9 656 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 CCDC150Q8NCX0 1101 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 BEST2Q8NFU1 509 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 HLA-CQ95604 372 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 PABPC5Q96DU9 382 aaKnown RBP17.92■□□□□ 0.46
GCDH-203ENST00000585420 IQCDQ96DY2 449 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 PI4K2AQ9BTU6 479 aa17.92■□□□□ 0.46
GCDH-203ENST00000585420 SIX2Q9NPC8 291 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms