RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 TLR10Q9BXR5 811 aa10.72□□□□□ -0.69
TRAPPC8-211ENST00000582539 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
TRAPPC8-211ENST00000582539 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC8-211ENST00000582539 REXO2Q9Y3B8 237 aaKnown RBP10.72□□□□□ -0.69
TRAPPC8-211ENST00000582539 F9P00740 461 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 GLI1P08151 1106 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 ITGA4P13612 1032 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 ALDH3A1P30838 453 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 ACOT2P49753 483 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 SLC13A5Q86YT5 568 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 SLC12A6Q9UHW9 1150 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 HTR7P34969 479 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 AARSP49588 968 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 PSMC1P62191 440 aaKnown RBP10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 C2orf54Q08AI8 447 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 BFSP2Q13515 415 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 LY6KQ17RY6 165 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 GPAT2Q6NUI2 795 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 SIX6OS1Q8N1H7 587 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 HSFY1Q96LI6 401 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.69
TRAPPC8-211ENST00000582539 BUB1BO60566 1050 aaPredicted RBP10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 C22orf31O95567 290 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 GSTA2P09210 222 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 KRT3P12035 628 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 DNAJB2P25686 324 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 CYP2C18P33260 490 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 PTPN7P35236 360 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 SMARCB1Q12824 385 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 ARMC3Q5W041 872 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 TOP6BLQ8N6T0 577 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 DYDC1Q8WWB3 177 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 TMEM176AQ96HP8 235 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.7
TRAPPC8-211ENST00000582539 SRGAP2BP0DMP2 458 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 STIP1P31948 543 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CENPUQ71F23 418 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 TRIM50Q86XT4 487 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 NSMCE1Q8WV22 266 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 TSNARE1Q96NA8 513 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CNPY3Q9BT09 278 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 FTHL17Q9BXU8 183 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 GDF3Q9NR23 364 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 PCYOX1Q9UHG3 505 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 NUB1Q9Y5A7 615 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 H3BRJ5 948 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 RPS6KA5O75582 802 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 HOXD8P13378 290 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 BRCA1P38398 1863 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ADCY8P40145 1251 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 NLRP11P59045 1033 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 TWF2Q6IBS0 349 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ELMSAN1Q6PJG2 1045 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 SLC51AQ86UW1 340 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 DCP1BQ8IZD4 617 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 C12orf50Q8NA57 414 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ERP44Q9BS26 406 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CDT1Q9H211 546 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 EFCC1Q9HA90 598 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CA12O43570 354 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 LMAN1P49257 510 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 GSCP56915 257 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 STAT4Q14765 748 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 C4orf50Q6ZRC1 276 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CREG2Q8IUH2 290 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 LRRC15Q8TF66 581 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 MED10Q9BTT4 135 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CISHQ9NSE2 258 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 VPS18Q9P253 973 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 DRG1Q9Y295 367 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CAPN6Q9Y6Q1 641 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 M0QYV0 167 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 PGK2P07205 417 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 ODC1P11926 461 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 FSCN1Q16658 493 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 CCNJLQ8IV13 435 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 C11orf70Q9BRQ4 267 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
TRAPPC8-211ENST00000582539 KBTBD13C9JR72 458 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 RGS16O15492 202 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 TLR2O60603 784 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 CNMDO75829 334 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 GPD1P21695 349 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 LAMB3Q13751 1172 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 KLHL38Q2WGJ6 581 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 OR6B2Q6IFH4 312 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 RCOR3Q9P2K3 495 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC8-211ENST00000582539 MID2Q9UJV3 735 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms