RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 NT5DC1Q5TFE4 455 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 DDX12PQ92771 950 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 KIFC3Q9BVG8 833 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 TOPORSQ9NS56 1045 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 ASH1LQ9NR48 2969 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 VNN2O95498 520 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 EGFP01133 1207 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 OR4Q2P0C623 313 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.213e-10■□□□□ 9.9
CSNK1D-218ENST00000581655 GABRR2P28476 465 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 EPHB3P54753 998 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 DUSP4Q13115 394 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 EARS2Q5JPH6 523 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 BEST2Q8NFU1 509 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 KCNB2Q92953 911 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 CHFRQ96EP1 664 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 GKN1Q9NS71 199 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 TPCN1Q9ULQ1 816 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 INVSQ9Y283 1065 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 ACACAQ13085 2346 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 PI4KAP42356 2102 aa13.76□□□□□ -0.21
CSNK1D-218ENST00000581655 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 TRDMT1O14717 391 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 APBB3O95704 486 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 GRM5P41594 1212 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 ALDH1A3P47895 512 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 MCM2P49736 904 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 IRX4P78413 519 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 CALCRLQ16602 461 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 CYP2U1Q7Z449 544 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 SMG9Q9H0W8 520 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 CDT1Q9H211 546 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 FBRSL1Q9HCM7 1045 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-218ENST00000581655 ZNF638Q14966 1978 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 OTOL1A6NHN0 477 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 KCNE1P15382 129 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 TXKP42681 527 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 DGKEP52429 567 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 CYP4F8P98187 520 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 RUNX3Q13761 415 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 DMC1Q14565 340 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 PDZD3Q86UT5 571 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 PROSER1Q86XN7 944 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 RPLP0P6Q8NHW5 317 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 PSMG2Q969U7 264 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 FAM83CQ9BQN1 747 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 POLR3CQ9BUI4 534 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 EBF3Q9H4W6 596 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 SLC32A1Q9H598 525 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 SLC27A5Q9Y2P5 690 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 GPSM3Q9Y4H4 160 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 TIMM13Q9Y5L4 95 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 ASXL3Q9C0F0 2248 aa13.74□□□□□ -0.21
CSNK1D-218ENST00000581655 SPAARA0A1B0GVQ0 90 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 SOAT2O75908 522 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 CYP11B2P19099 503 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 EFNA5P52803 228 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 SIM1P81133 766 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 YWHAHQ04917 246 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 STK3Q13188 491 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 ZNF568Q3ZCX4 644 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 NAIF1Q69YI7 327 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 SYT13Q7L8C5 426 aa13.73□□□□□ -0.21
CSNK1D-218ENST00000581655 TTC9BQ8N6N2 239 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms