RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PPP4R3AQ6IN85 833 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 ACAD11Q709F0 780 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 TPH2Q8IWU9 490 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 VPS52Q8N1B4 723 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 PRSS33Q8NF86 280 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 SLC22A17Q8WUG5 538 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 TMEM169Q96HH4 297 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 IGSF21Q96ID5 467 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 CPB2Q96IY4 423 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 MFSD14AQ96MC6 490 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 LXNQ9BS40 222 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 EIF2AQ9BY44 585 aaKnown RBP6.93□□□□□ -1.3
NUP88-212ENST00000576708 MRPL9Q9BYD2 267 aaKnown RBP6.93□□□□□ -1.3
NUP88-212ENST00000576708 ZBP1Q9H171 429 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 POMKQ9H5K3 350 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 DHX33Q9H6R0 707 aaKnown RBP6.93□□□□□ -1.3
NUP88-212ENST00000576708 XPNPEP1Q9NQW7 623 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 AGPAT5Q9NUQ2 364 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 MIOSQ9NXC5 875 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
NUP88-212ENST00000576708 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 BTBD18B2RXH4 712 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 C2CD4DB7Z1M9 353 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 F8W810 466 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ZNF623O75123 536 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 POMCP01189 267 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ASGR2P07307 311 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 SRGAP2BP0DMP2 458 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 CTSAP10619 480 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 GCFC2P16383 781 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 KRT2P35908 639 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 GUCY1B3Q02153 619 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ST3GAL1Q11201 340 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 EMC2Q15006 297 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 PTPN21Q16825 1174 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 TAS1R1Q7RTX1 841 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 MRPL10Q7Z7H8 261 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 DDX53Q86TM3 631 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 FERMT3Q86UX7 667 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 CD163Q86VB7 1156 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 CDR2LQ86X02 465 aaPredicted RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 C4orf19Q8IY42 314 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 FAM177A1Q8N128 213 aaPredicted RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 RNF149Q8NC42 400 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 PSPC1Q8WXF1 523 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 CASP10Q92851 521 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 GTF3C6Q969F1 213 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ASIC4Q96FT7 647 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 EIF2AK1Q9BQI3 630 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 JPH2Q9BR39 696 aaPredicted RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 APOL6Q9BWW8 343 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 NRSN2Q9GZP1 204 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
NUP88-212ENST00000576708 TMEM60Q9H2L4 133 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ADAM7Q9H2U9 754 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 ZSWIM4Q9H7M6 989 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 CBX8Q9HC52 389 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 HES2Q9Y543 173 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 TECTAO75443 2155 aa6.92□□□□□ -1.3
NUP88-212ENST00000576708 C9orf172C9J069 976 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 NRP1O14786 923 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TBX3O15119 743 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 B4GALT5O43286 388 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TSPAN1O60635 241 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 DKC1O60832 514 aaKnown RBP eCLIP6.91□□□□□ -1.3
NUP88-212ENST00000576708 BAG4O95429 457 aaKnown RBP6.91□□□□□ -1.3
NUP88-212ENST00000576708 CYP11A1P05108 521 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
NUP88-212ENST00000576708 XBP1P17861 261 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 ATP2B1P20020 1258 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TXKP42681 527 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 MRE11P49959 708 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 RAB27AP51159 221 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 SIGLEC14Q08ET2 396 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 CAPSQ13938 189 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 PTPN14Q15678 1187 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 CALCRLQ16602 461 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 CES5AQ6NT32 575 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TMC5Q6UXY8 1006 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 MAEAQ7L5Y9 396 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 OTUD6AQ7L8S5 288 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 BMP8AQ7Z5Y6 402 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 SRGAP1Q7Z6B7 1085 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 SULF2Q8IWU5 870 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 DIS3L2Q8IYB7 885 aaKnown RBP6.91□□□□□ -1.3
NUP88-212ENST00000576708 FBXL6Q8N531 539 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 URGCPQ8TCY9 931 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 PIGOQ8TEQ8 1089 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 RABGGTAQ92696 567 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 PGBD4Q96DM1 585 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms