RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KANSL3Q9P2N6 904 aa10.16□□□□□ -0.78
NPLOC4-210ENST00000572824 CA14Q9ULX7 337 aa10.16□□□□□ -0.78
NPLOC4-210ENST00000572824 PCDHGC4Q9Y5F7 938 aa10.16□□□□□ -0.78
NPLOC4-210ENST00000572824 TICRRQ7Z2Z1 1910 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 NPHP3-ACAD11A0A0J9YXS1 232 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CDC14CA4D256 554 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ABLIM1O14639 778 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ATXN7O15265 892 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CCL16O15467 120 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 HIP1RO75146 1068 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 TKTP29401 623 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 IDH3AP50213 366 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CLCNKBP51801 687 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CDR1P51861 262 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 TYRO3Q06418 890 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 TUSC3Q13454 348 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 GIT2Q14161 759 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 PSMD5Q16401 504 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 FAM187BQ17R55 369 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ALKBH2Q6NS38 261 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 GRASPQ7Z6J2 395 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 FRMD5Q7Z6J6 570 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 PPFIBP1Q86W92 1011 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ZBTB8OSQ8IWT0 167 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 EXOC8Q8IYI6 725 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 UBALD2Q8IYN6 164 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 MCPH1Q8NEM0 835 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 DEPTORQ8TB45 409 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ITFG1Q8TB96 612 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 SNX29Q8TEQ0 813 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ING5Q8WYH8 240 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 C18orf25Q96B23 403 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 ZBTB45Q96K62 511 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 PNMA5Q96PV4 448 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 PPP1R10Q96QC0 940 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 NACC1Q96RE7 527 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 COLEC11Q9BWP8 271 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 HAPLN2Q9GZV7 340 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 CDT1Q9H211 546 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 KCNH6Q9H252 994 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 WDR6Q9NNW5 1121 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 FBXW11Q9UKB1 542 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 DUSP12Q9UNI6 340 aa10.15□□□□□ -0.78
NPLOC4-210ENST00000572824 DNAH14Q0VDD8 3507 aa10.15□□□□□ -0.79
NPLOC4-210ENST00000572824 SCN1AP35498 2009 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 ACKR2O00590 384 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 N4BP3O15049 544 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 TADA2AO75478 443 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 NAMPTP43490 491 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 PEX3P56589 373 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 GRIN1Q05586 938 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 SPAG1Q07617 926 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 TDGQ13569 410 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 HTR4Q13639 388 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 BMS1Q14692 1282 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 SAFBQ15424 915 aaKnown RBP eCLIP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 SLC5A9Q2M3M2 681 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 USP41Q3LFD5 358 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 ATF7IP2Q5U623 682 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 PARM1Q6UWI2 310 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 C15orf39Q6ZRI6 1047 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 IGSF22Q8N9C0 903 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 CMASQ8NFW8 434 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 GPR152Q8TDT2 470 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 FGF14Q92915 247 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 TARS2Q9BW92 718 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 FOXQ1Q9C009 403 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 MFSD1Q9H3U5 465 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 UBN1Q9NPG3 1134 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 LRWD1Q9UFC0 647 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 NUMBLQ9Y6R0 609 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 OTOGLQ3ZCN5 2332 aa10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 KIF26AQ9ULI4 1882 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-210ENST00000572824 NCANO14594 1321 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.792e-7■■■■□ 26.7
NPLOC4-210ENST00000572824 H3BM21 787 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 SLC16A4O15374 487 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 BNIP3LO60238 219 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 C8AP07357 584 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 FAM157BP0CG42 384 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 GLULP15104 373 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.796e-21■■□□□ 11.5
NPLOC4-210ENST00000572824 OR1D2P34982 312 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 NPTX2P47972 431 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 GNL2Q13823 731 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 PCBP1Q15365 356 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 MAPK6Q16659 721 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 ZBTB41Q5SVQ8 909 aa10.13□□□□□ -0.79
NPLOC4-210ENST00000572824 SV2AQ7L0J3 742 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms