RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 FZD8Q9H461 694 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 TADA2AO75478 443 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 C2orf54Q08AI8 447 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 RSRC2Q7L4I2 434 aaKnown RBP12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 C18orf8Q96DM3 657 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 PBKQ96KB5 322 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 TSPAN1O60635 241 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 TMEM253P0C7T8 217 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 MYBL1P10243 752 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 SNX1Q13596 522 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 FAM102AQ5T9C2 384 aaPredicted RBP12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 ZNF296Q8WUU4 475 aaPredicted RBP12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
TMEM170A-205ENST00000568559 CALCAP01258 141 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 ATICP31939 592 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 PURAQ00577 322 aaKnown RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 KCTD19Q17RG1 926 aaPredicted RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 C1orf131Q8NDD1 294 aaKnown RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 FIZ1Q96SL8 496 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 OSBPL9Q96SU4 736 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 AP1M1Q9BXS5 423 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 LRRD1A4D1F6 860 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 KRT1P04264 644 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 RWDD2BP57060 319 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 PARVAQ9NVD7 372 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 BNIP3LO60238 219 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 NOL4O94818 638 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 SLC4A1P02730 911 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 SEPT8Q92599 483 aa12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
TMEM170A-205ENST00000568559 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.354e-9■■■■□ 21.4
TMEM170A-205ENST00000568559 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 GNRH1P01148 92 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 FGGP02679 453 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 ACAD10Q6JQN1 1059 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 MORC4Q8TE76 937 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 CALN1Q9BXU9 219 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 KCNK9Q9NPC2 374 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 DLEC1Q9Y238 1755 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 CYB561D2O14569 222 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 LCP1P13796 627 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 ACLYP53396 1101 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 TRIP13Q15645 432 aaPredicted RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 LPPQ93052 612 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 VPS18Q9P253 973 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 RNF14Q9UBS8 474 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 MIF4GDA9UHW6 222 aaKnown RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 KRT3P12035 628 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 MLH1P40692 756 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 GRM5P41594 1212 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 CASC4Q6P4E1 433 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 FGD4Q96M96 766 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 PCSK1NQ9UHG2 260 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 LPXNO60711 386 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 PRMT2P55345 433 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 SND1Q7KZF4 910 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 STIM2Q9P246 746 aa12.87□□□□□ -0.35
TMEM170A-205ENST00000568559 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms