RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ALG6Q9Y672 507 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 SMIM28A0A1B0GU29 152 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 GJB6O95452 261 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 CYP1A2P05177 515 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 RAD23BP54727 409 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 SOX4Q06945 474 aaPredicted RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 MGAT3Q09327 533 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 MESDQ14696 234 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 MON1BQ7L1V2 547 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 RHOT2Q8IXI1 618 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 GTF3C4Q9UKN8 822 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 ITGA11Q9UKX5 1188 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 PDCD11Q14690 1871 aaKnown RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 DAB2IPQ5VWQ8 1189 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 SESTD1Q86VW0 696 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 SPATA4Q8NEY3 305 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF564Q8TBZ8 553 aaPredicted RBP12.1□□□□□ -0.47
LINC00562-201ENST00000566385 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 SH3TC2Q8TF17 1288 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 TAF4BQ92750 862 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 ELOVL4Q9GZR5 314 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
LINC00562-201ENST00000566385 M0QZ92 97 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 RBP5P82980 135 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 MMS22LQ6ZRQ5 1243 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 RNF180Q86T96 592 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 PCSK9Q8NBP7 692 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 C1orf131Q8NDD1 294 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 KRT35Q92764 455 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 LPPQ93052 612 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 TJP2Q9UDY2 1190 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 PTCH2Q9Y6C5 1203 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 HCRTO43612 131 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 CILPO75339 1184 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 GHRP10912 638 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 CD19P15391 556 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 H2AFXP16104 143 aaPredicted RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 CD52P31358 61 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 ATICP31939 592 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 AADACL2Q6P093 401 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 CD302Q8IX05 232 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 ALG3Q92685 438 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
LINC00562-201ENST00000566385 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
LINC00562-201ENST00000566385 PTGESO14684 152 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 SPTLC1O15269 473 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 MGEA5O60502 916 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 FKTNO75072 461 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
LINC00562-201ENST00000566385 COMTP21964 271 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 GRK4P32298 578 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 SYCE1Q8N0S2 351 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 GSTCDQ8NEC7 633 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 HDAC7Q8WUI4 952 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 PADI3Q9ULW8 664 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 CEP104O60308 925 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 ZMYND10O75800 440 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 MTA2O94776 668 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 CLCN6P51797 869 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 NDST1P52848 882 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 ZNF211Q13398 564 aaPredicted RBP12.08□□□□□ -0.48
LINC00562-201ENST00000566385 XKR4Q5GH76 650 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
LINC00562-201ENST00000566385 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms