RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 APBA1Q02410 837 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 KCNT2Q6UVM3 1135 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 NT5C1BQ96P26 610 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 NXF1Q9UBU9 619 aaKnown RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 NCOR1O75376 2440 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 CARNS1A5YM72 827 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 KPNA7A9QM74 516 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 TADA2AO75478 443 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 TNNC1P63316 161 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 TMEM173Q86WV6 379 aaPredicted RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 UHRF1Q96T88 793 aaPredicted RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 VRTNQ9H8Y1 702 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 FAM207AQ9NSI2 230 aaPredicted RBP16.38■□□□□ 0.21
KNOP1-203ENST00000565844 MARCH5Q9NX47 278 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 PCDHB12Q9Y5F1 795 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 PLXNA4Q9HCM2 1894 aa16.38■□□□□ 0.21
KNOP1-203ENST00000565844 I3L4J1 428 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 ADCY5O95622 1261 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 LINC00271P0C7V0 271 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 P4HA1P13674 534 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 PAX3P23760 479 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 PBX1P40424 430 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 BRCC3P46736 316 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 CD300LGQ6UXG3 332 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 SCARA5Q6ZMJ2 495 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 ARHGEF19Q8IW93 802 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 SLC39A11Q8N1S5 342 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 PPM1KQ8N3J5 372 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 BCL7CQ8WUZ0 217 aaPredicted RBP16.37■□□□□ 0.21
KNOP1-203ENST00000565844 TATDN2Q93075 761 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 MMS19Q96T76 1030 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 PLCB1Q9NQ66 1216 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 APEX2Q9UBZ4 518 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 POLIQ9UNA4 740 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 SNX9Q9Y5X1 595 aa16.37■□□□□ 0.21
KNOP1-203ENST00000565844 TNFRSF10AO00220 468 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 TRAPPC3O43617 180 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 CTNNB1P35222 781 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 PPM1AP35813 382 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 ASPAP45381 313 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
KNOP1-203ENST00000565844 TIGD5Q53EQ6 642 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 GJB7Q6PEY0 223 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 VSTM4Q8IW00 320 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 TMEM169Q96HH4 297 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 IGSF21Q96ID5 467 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 SENP8Q96LD8 212 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 GDAP2Q9NXN4 497 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 SPG21Q9NZD8 308 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 SF3B1O75533 1304 aaKnown RBP eCLIP16.36■□□□□ 0.21
KNOP1-203ENST00000565844 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
KNOP1-203ENST00000565844 CYB561D2O14569 222 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 EPHB6O15197 1021 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 HUS1O60921 280 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 BMP1P13497 986 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 TRIM21P19474 475 aaKnown RBP16.35■□□□□ 0.21
KNOP1-203ENST00000565844 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
KNOP1-203ENST00000565844 GPM6BQ13491 265 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 CUL2Q13617 745 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 SPECC1LQ69YQ0 1117 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 HLA-CQ95604 372 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 SUSD3Q96L08 255 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 ARID3AQ99856 593 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 GANQ9H2C0 597 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 SMYD3Q9H7B4 428 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 UBE2TQ9NPD8 197 aaPredicted RBP16.35■□□□□ 0.21
KNOP1-203ENST00000565844 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
KNOP1-203ENST00000565844 M0QZQ0 153 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 NOL4O94818 638 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 ODC1P11926 461 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 UCHL3P15374 230 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 RFX1P22670 979 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 BMPR1AP36894 532 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 RAP1GAPP47736 663 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 MFAP3P55082 362 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
KNOP1-203ENST00000565844 GCNT1Q02742 428 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 SOWAHAQ2M3V2 549 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 TOP6BLQ8N6T0 577 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 KAT5Q92993 513 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
KNOP1-203ENST00000565844 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms