RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 UBN1Q9NPG3 1134 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 PTPRJQ12913 1337 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 ANKRD62A6NC57 917 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 C9IYK1 514 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 CES2O00748 559 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 ITGA4P13612 1032 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 CXCR5P32302 372 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 MRPL10Q7Z7H8 261 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 MMGT1Q8N4V1 131 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 BADQ92934 168 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 ISCUQ9H1K1 167 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 ELAC1Q9H777 363 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 OGFRQ9NZT2 677 aa13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-208ENST00000565070 ENPP3O14638 875 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 CHRNB2P17787 502 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 TNFSF9P41273 254 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 OSTNP61366 133 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 FAM189BP81408 668 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 TCEAL1Q15170 157 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 TDRD10Q5VZ19 366 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 PSRC1Q6PGN9 363 aaPredicted RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 NOP9Q86U38 636 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 ECHDC2Q86YB7 292 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 SMG8Q8ND04 991 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 CTNNBL1Q8WYA6 563 aaPredicted RBP13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 PSMB7Q99436 277 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 ASB7Q9H672 318 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 PDE11AQ9HCR9 933 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 TAS2R14Q9NYV8 317 aa13.54□□□□□ -0.24
NSMCE1-208ENST00000565070 CYP26A1O43174 497 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 GZMAP12544 262 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 TNNI1P19237 187 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 VSNL1P62760 191 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CCDC181Q5TID7 509 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SLC47A2Q86VL8 602 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CEP120Q8N960 986 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SLC35G2Q8TBE7 412 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 TATDN2Q93075 761 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 ZMYND8Q9ULU4 1186 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 ANK1P16157 1881 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 TTC3P53804 2025 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 HOXA2O43364 376 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 RECQL4O94761 1208 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 KIF4AO95239 1232 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 VNN1O95497 513 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CXCL8P10145 99 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 CYP11B1P15538 503 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SYN1P17600 705 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 USP8P40818 1118 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 AP3M2P53677 418 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 HADHBP55084 474 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 RTN4RL1Q86UN2 441 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 SNX27Q96L92 541 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 THAP2Q9H0W7 228 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.245e-8■■■■■ 402.4
NSMCE1-208ENST00000565070 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 DERAQ9Y315 318 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 HES2Q9Y543 173 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 PCDHB7Q9Y5E2 793 aa13.53□□□□□ -0.24
NSMCE1-208ENST00000565070 RTN2O75298 545 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 ERLIN1O75477 346 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 SEC31AO94979 1220 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 FGBP02675 491 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 AMHP03971 560 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 MCM3P25205 808 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 FMO1Q01740 532 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 CDR2Q01850 454 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 BEND6Q5SZJ8 279 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 SCARA3Q6AZY7 606 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 ZNF598Q86UK7 904 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms