RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	VPS16	Q9H269	839 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	SH3BP4	Q9P0V3	963 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	CTTNBP2NL	Q9P2B4	639 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	ZBTB21	Q9ULJ3	1066 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	MAPRE3	Q9UPY8	281 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	WDR27	A2RRH5	827 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	KCNU1	A8MYU2	1149 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	ZEB2	O60315	1214 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	NHLRC4	P0CG21	123 aa	Predicted RBP	4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	NR2F6	P10588	404 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	MTHFD2	P13995	350 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	ZNF134	P52741	427 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	MC2R	Q01718	297 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	STRN3	Q13033	797 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	DYRK1A	Q13627	763 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	LAMB3	Q13751	1172 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	KCNK18	Q7Z418	384 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	RNF180	Q86T96	592 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	NSUN7	Q8NE18	718 aa	Known RBP	4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	LMBR1	Q8WVP7	490 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	SNX19	Q92543	992 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	KLC4	Q9NSK0	619 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	PCDHB1	Q9Y5F3	818 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	ADGRA2	Q96PE1	1338 aa		4.85	□□□□□ -1.63
SLTM-223	ENST00000560532	SMIM22	K7EJ46	135 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	TOR1B	O14657	336 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	ENDOD1	O94919	500 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	RHO	P08100	348 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	MCAM	P43121	646 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	SLC6A9	P48067	706 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	PLCD1	P51178	756 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	NXPH1	P58417	271 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	SRSF2	Q01130	221 aa	Known RBP	4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	MALL	Q13021	153 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	MTM1	Q13496	603 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	SEPT2	Q15019	361 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	UBR7	Q8N806	425 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	PBK	Q96KB5	322 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	VTA1	Q9NP79	307 aa		4.84	□□□□□ -1.63
SLTM-223	ENST00000560532	TISP43	B9A030	160 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	HAUS5	O94927	633 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	ARHGAP25	P42331	645 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	CREM	Q03060	361 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	ITIH3	Q06033	890 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	ZNF844	Q08AG5	666 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	LRRC41	Q15345	812 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	ANO4	Q32M45	955 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	PRAMEF17	Q5VTA0	474 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	KIAA1161	Q6NSJ0	714 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	STRA8	Q7Z7C7	330 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	CNGA4	Q8IV77	575 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	ZGPAT	Q8N5A5	531 aa	Known RBP	4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	FBXO41	Q8TF61	875 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	CAMKK2	Q96RR4	588 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	TUBA8	Q9NY65	449 aa	Predicted RBP	4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	PCDHGA2	Q9Y5H1	932 aa		4.83	□□□□□ -1.64
SLTM-223	ENST00000560532	SUN1	O94901	812 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	AGFG2	O95081	481 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	AMY1A	P04745	511 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	SLC6A4	P31645	630 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	ANXA11	P50995	505 aa	Known RBP	4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	TAF7L	Q5H9L4	462 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	PXDC1	Q5TGL8	231 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	EGFLAM	Q63HQ2	1017 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	ORAI2	Q96SN7	254 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	DNM3	Q9UQ16	869 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	APOBEC2	Q9Y235	224 aa	Known RBP	4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	NEU2	Q9Y3R4	380 aa		4.82	□□□□□ -1.64
SLTM-223	ENST00000560532	SMIM35	A0A1B0GVV1	85 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	MYMK	A6NI61	221 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	TUBB4A	P04350	444 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	DDC	P20711	480 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	MASP1	P48740	699 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	LINC00205	P59089	165 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	CEP85	Q6P2H3	762 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	RFK	Q969G6	155 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	CYFIP2	Q96F07	1278 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	PRSS22	Q9GZN4	317 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	DNAJC28	Q9NX36	388 aa		4.81	□□□□□ -1.64
SLTM-223	ENST00000560532	CACNA1I	Q9P0X4	2223 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	CCDC195	A0A1B0GUA6	201 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	VIL1	P09327	827 aa	Known RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	OSM	P13725	252 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	MGAT2	Q10469	447 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	MEPCE	Q7L2J0	689 aa	Known RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	KRT73	Q86Y46	540 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	OR2I1P	Q8NGU4	316 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	REPS1	Q96D71	796 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	SLK	Q9H2G2	1235 aa	Predicted RBP	4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	CAAP1	Q9H8G2	361 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	C14orf119	Q9NWQ9	140 aa		4.8	□□□□□ -1.64
SLTM-223	ENST00000560532	JTB	O76095	146 aa		4.79	□□□□□ -1.64
SLTM-223	ENST00000560532	GPR3	P46089	330 aa		4.79	□□□□□ -1.64
SLTM-223	ENST00000560532	SLC5A3	P53794	718 aa		4.79	□□□□□ -1.64
SLTM-223	ENST00000560532	ATP8B2	P98198	1209 aa		4.79	□□□□□ -1.64
SLTM-223	ENST00000560532	UTP14C	Q5TAP6	766 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms