RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 MAP3K13O43283 966 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PALMO75781 387 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 TRIM59Q8IWR1 403 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 FTHL17Q9BXU8 183 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 DRG1Q9Y295 367 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 C2orf81A6NN90 581 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 E2F6O75461 281 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
NEK9-210ENST00000557026 ATP1A1P05023 1023 aaKnown RBP12.53□□□□□ -0.4
NEK9-210ENST00000557026 C10orf120Q5SQS8 335 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 FAR2Q96K12 515 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 WWP1Q9H0M0 922 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KLHL11Q9NVR0 708 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK9-210ENST00000557026 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 TNS2Q63HR2 1409 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 TLR2O60603 784 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 THP07101 528 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KCNA2P16389 499 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 CDC25AP30304 524 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 DSG3P32926 999 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 HPCAP84074 193 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 SNCBQ16143 134 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 C11orf57Q6ZUT1 292 aaPredicted RBP12.53□□□□□ -0.4
NEK9-210ENST00000557026 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 TMEM199Q8N511 208 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KLHL29Q96CT2 875 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 WDR41Q9HAD4 459 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK9-210ENST00000557026 NCKAP1Q9Y2A7 1128 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ZNF609O15014 1411 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 M0R3G1 203 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 HADHAP40939 763 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 BCAT1P54687 386 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ITPK1Q13572 414 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 RETSATQ6NUM9 610 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 RSPH1Q8WYR4 309 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 NAGPAQ9UK23 515 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 DNPEPQ9ULA0 475 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 SLC15A5A6NIM6 579 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 NR1D1P20393 614 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
NEK9-210ENST00000557026 PTRHD1Q6GMV3 140 aaKnown RBP12.53□□□□□ -0.4
NEK9-210ENST00000557026 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 SNX5Q9Y5X3 404 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
NEK9-210ENST00000557026 SREBF1P36956 1147 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 AVPR1AP37288 418 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 HIF1AQ16665 826 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 Q4G0T1 1027 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.4
NEK9-210ENST00000557026 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 NLNQ9BYT8 704 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 PITPNM3Q9BZ71 974 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 DPP3Q9NY33 737 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 UMODL1Q5DID0 1318 aa12.52□□□□□ -0.4
NEK9-210ENST00000557026 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.4
NEK9-210ENST00000557026 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 RASA4BC9J798 803 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 RASA4O43374 803 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 GRK3P35626 688 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 NLRP11P59045 1033 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 FASTKD1Q53R41 847 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 EPM2AIP1Q7L775 607 aaPredicted RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 GRAMD1CQ8IYS0 662 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 TMCO5AQ8N6Q1 288 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 GPT2Q8TD30 523 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 MRPL48Q96GC5 212 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 OXCT2Q9BYC2 517 aaPredicted RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 SOAT2O75908 522 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 UPP2O95045 317 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 HLA-DRAP01903 254 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 RPN2P04844 631 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 PPM1AP35813 382 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 GPS1Q13098 491 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 RBBP7Q16576 425 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms