RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 HOXA11P31270 313 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ACTN2P35609 894 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 HNF1BP35680 557 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MCM2P49736 904 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 UCNP55089 124 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 SPIRE1Q08AE8 756 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 RUNX3Q13761 415 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 BECN1Q14457 450 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 RTP5Q14D33 572 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 PTPRNQ16849 979 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 HES3Q5TGS1 186 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MIS18BP1Q6P0N0 1132 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MFSD6Q6ZSS7 791 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ZC3H18Q86VM9 953 aaKnown RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 TMPRSS12Q86WS5 348 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ELMOD1Q8N336 334 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF248Q8NDW4 579 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 GSTCDQ8NEC7 633 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 TTC16Q8NEE8 873 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 USP33Q8TEY7 942 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ESR2Q92731 530 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 DDX27Q96GQ7 796 aaKnown RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 CPB2Q96IY4 423 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF512Q96ME7 567 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ZSCAN10Q96SZ4 725 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MXRA8Q9BRK3 442 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 CHMP4BQ9H444 224 aaKnown RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 NXF3Q9H4D5 531 aaKnown RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 GAREM1Q9H706 876 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MINDY3Q9H8M7 445 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 TM7SF3Q9NS93 570 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 STARD5Q9NSY2 213 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 ECHDC1Q9NTX5 307 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 WDR70Q9NW82 654 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 GABBR1Q9UBS5 961 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 TDRD15B5MCY1 1934 aaKnown RBP4.73□□□□□ -1.65
ATXN3-242ENST00000556644 PTPRDP23468 1912 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 MYO16Q9Y6X6 1858 aa4.73□□□□□ -1.65
ATXN3-242ENST00000556644 KIAA1549LQ6ZVL6 1849 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 TCRBV21S2A2A0A5A6 115 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 SPDYE3A6NKU9 549 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 FLRT2O43155 660 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 TNFSF14O43557 240 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 ALDH1A2O94788 518 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 FGAP02671 866 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 OATP04181 439 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 ITGB2P05107 769 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 FAM87AP0C7U9 286 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 RLBP1P12271 317 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 GJA4P35212 333 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PCBP4P57723 403 aaKnown RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 CYP4F8P98187 520 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PLCB2Q00722 1185 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PRKCEQ02156 737 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PTH1RQ03431 593 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 GRIK3Q13003 919 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PTPAQ15257 358 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 CRY1Q16526 586 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 UGCGQ16739 394 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 SKIDA1Q1XH10 827 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 MTERF2Q49AM1 385 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 FBXO43Q4G163 708 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 GPR158Q5T848 1215 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 RABEPKQ7Z6M1 372 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 CDR2LQ86X02 465 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 IQCA1Q86XH1 822 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 SFTPA1Q8IWL2 248 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 ZCCHC9Q8N567 271 aaKnown RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 ALLCQ8N6M5 410 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 RIN3Q8TB24 985 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 KCNE4Q8WWG9 221 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 SLC7A3Q8WY07 619 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 CD101Q93033 1021 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 FAM83CQ9BQN1 747 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 NRSN2Q9GZP1 204 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 EPN3Q9H201 632 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 CXCL16Q9H2A7 254 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 SUCLA2Q9P2R7 463 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PARP2Q9UGN5 583 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 MMP17Q9ULZ9 603 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PCDHA6Q9UN73 950 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 PCDHA8Q9Y5H6 950 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 MAFBQ9Y5Q3 323 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-242ENST00000556644 OTOGQ6ZRI0 2925 aa4.72□□□□□ -1.65
ATXN3-242ENST00000556644 ABCA2Q9BZC7 2435 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 A0A1W2PQD8 194 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 SGK1O00141 431 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 PIK3CDO00329 1044 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ZNF213O14771 459 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 MAFGO15525 162 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 KLF8O95600 359 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ITGB6P18564 788 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 FGFR3P22607 806 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 MATKP42679 507 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 BRCC3P46736 316 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 EPHA5P54756 1037 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms