RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 EFNA5P52803 228 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 EPHB3P54753 998 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 DUSP4Q13115 394 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 NR5A1Q13285 461 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 ITPRIPL2Q3MIP1 535 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 TMC8Q8IU68 726 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 SUSD3Q96L08 255 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 MKNK1Q9BUB5 465 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 ATXN3LQ9H3M9 355 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 ATRXP46100 2492 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 LNP1A1A4G5 178 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 K7ERI5 159 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 MED24O75448 989 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 RHOBTB1O94844 696 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 VNN2O95498 520 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 CEACAM1P13688 526 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 PLD1Q13393 1074 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 PTPAQ15257 358 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ELF2Q15723 593 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 GPR158Q5T848 1215 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 FSTL4Q6MZW2 842 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 DNAJB7Q7Z6W7 309 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 CAMKK1Q8N5S9 505 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 BPIFB1Q8TDL5 484 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ZCCHC14Q8WYQ9 949 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 GATA6Q92908 595 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ACAP3Q96P50 834 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 CDT1Q9H211 546 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 THG1LQ9NWX6 298 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 TNFSF13BQ9Y275 285 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 TIMM13Q9Y5L4 95 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 GREB1Q4ZG55 1949 aa11.81□□□□□ -0.52
TRAFD1-206ENST00000549358 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 NEMFO60524 1076 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 CDKL5O76039 1030 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 KCNE1P15382 129 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 GABRR2P28476 465 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 ZNF568Q3ZCX4 644 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 GAREM2Q75VX8 874 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 HHIPQ96QV1 700 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 TCHPQ9BT92 498 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 TUFT1Q9NNX1 390 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 GKN1Q9NS71 199 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 OBP2AQ9NY56 170 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-206ENST00000549358 BCLAF3A2AJT9 711 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 WNT7AO00755 349 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 RNF40O75150 1001 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 SOAT2O75908 522 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 OAZ2O95190 189 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 PRAMEF12O95522 483 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 EGFP01133 1207 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 CSRP1P21291 193 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 GBP1P32455 592 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 KRT2P35908 639 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 SCRN1Q12765 414 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 KIAA1211LQ6NV74 962 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 TNFRSF25Q93038 417 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 ACO2Q99798 780 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 PTPRHQ9HD43 1115 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 CNTN3Q9P232 1028 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 INVSQ9Y283 1065 aa11.79□□□□□ -0.52
TRAFD1-206ENST00000549358 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 PATE3B3GLJ2 98 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 FGF19O95750 216 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 HARSP12081 509 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 MCM2P49736 904 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 GALK1P51570 392 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 CYP4F8P98187 520 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 GPR17Q13304 367 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 RUNX3Q13761 415 aa11.78□□□□□ -0.52
TRAFD1-206ENST00000549358 UAP1L1Q3KQV9 507 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms