RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
RTN3-214ENST00000545432 FRYQ5TBA9 3013 aa16.08■□□□□ 0.17
RTN3-214ENST00000545432 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
RTN3-214ENST00000545432 FGF19O95750 216 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 CPB1P15086 417 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 MCM4P33991 863 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 EPHB3P54753 998 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 OSTNP61366 133 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 DUSP4Q13115 394 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 MYBPC2Q14324 1141 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 PLK5Q496M5 336 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 UNQ6494/PRO21346Q6UXR6 183 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 HAUS6Q7Z4H7 955 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 BPIFB1Q8TDL5 484 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 ZFYVE19Q96K21 471 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 TARS2Q9BW92 718 aaKnown RBP16.08■□□□□ 0.16
RTN3-214ENST00000545432 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
RTN3-214ENST00000545432 SLITRK6Q9H5Y7 841 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 ZMIZ1Q9ULJ6 1067 aa16.08■□□□□ 0.16
RTN3-214ENST00000545432 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
RTN3-214ENST00000545432 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.08■□□□□ 0.16
RTN3-214ENST00000545432 IGF2RP11717 2491 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 ASPMQ8IZT6 3477 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 C1QTNF9BB2RNN3 333 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 ATG13O75143 517 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 C1QTNF9P0C862 333 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 CYP3A5P20815 502 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 MPLP40238 635 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
RTN3-214ENST00000545432 TNK2Q07912 1038 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 CCDC6Q16204 474 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 ITPRIPL2Q3MIP1 535 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 MPZL3Q6UWV2 235 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 ERMNQ8TAM6 284 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 TASP1Q9H6P5 420 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 PLEKHA5Q9HAU0 1116 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
RTN3-214ENST00000545432 PDCD11Q14690 1871 aaKnown RBP16.06■□□□□ 0.16
RTN3-214ENST00000545432 TMEM8BA6NDV4 472 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 DPYSL4O14531 572 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 PRAMEF12O95522 483 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 HOXB3P14651 431 aaPredicted RBP16.06■□□□□ 0.16
RTN3-214ENST00000545432 TYMPP19971 482 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
RTN3-214ENST00000545432 MAPK7Q13164 816 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 PTPAQ15257 358 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 RNF43Q68DV7 783 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 FAM200AQ8TCP9 573 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 KCNN1Q92952 543 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
RTN3-214ENST00000545432 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 BCLAF3A2AJT9 711 aaKnown RBP16.05■□□□□ 0.16
RTN3-214ENST00000545432 MTMR11A4FU01 709 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 ADRB2P07550 413 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 KCNA4P22459 653 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 MCM7P33993 719 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 ALDH1A3P47895 512 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 PXNP49023 591 aaPredicted RBP16.05■□□□□ 0.16
RTN3-214ENST00000545432 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
RTN3-214ENST00000545432 PEX3P56589 373 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 GPR158Q5T848 1215 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 PSAPL1Q6NUJ1 521 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 C4orf32Q8N8J7 132 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 ZBTB45Q96K62 511 aaPredicted RBP16.05■□□□□ 0.16
RTN3-214ENST00000545432 ATXN3LQ9H3M9 355 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 SMOC1Q9H4F8 434 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 HPS4Q9NQG7 708 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 EBF1Q9UH73 591 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 ZMYM5Q9UJ78 669 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 ZZEF1O43149 2961 aa16.05■□□□□ 0.16
RTN3-214ENST00000545432 PKD1L2Q7Z442 2459 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 OTOL1A6NHN0 477 aaPredicted RBP16.04■□□□□ 0.16
RTN3-214ENST00000545432 SOBPA7XYQ1 873 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 TOM1L1O75674 476 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 CCDC192P0DO97 292 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 CSRP1P21291 193 aaKnown RBP16.04■□□□□ 0.16
RTN3-214ENST00000545432 PAX3P23760 479 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 GABRR2P28476 465 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 MCM2P49736 904 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 MCL1Q07820 350 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 GRSF1Q12849 480 aaKnown RBP eCLIP16.04■□□□□ 0.16
RTN3-214ENST00000545432 PDIA5Q14554 519 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 ARHGAP15Q53QZ3 475 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 ITIH5Q86UX2 942 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 ATAD1Q8NBU5 361 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
RTN3-214ENST00000545432 GATA6Q92908 595 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 PGLYRP2Q96PD5 576 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 SLC46A2Q9BY10 475 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 THG1LQ9NWX6 298 aaKnown RBP16.04■□□□□ 0.16
RTN3-214ENST00000545432 TUBGCP4Q9UGJ1 667 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms