RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 PGM2Q96G03 612 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 PPP1R16BQ96T49 567 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 OSBPL8Q9BZF1 889 aa13.15□□□□□ -0.3
USP10-202ENST00000540269 OGTO15294 1046 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 PAEPP09466 180 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TGFB3P10600 412 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 CHN1P15882 459 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 PTK6Q13882 451 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 IER5Q5VY09 327 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 MAF1Q9H063 256 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 CTNNAL1Q9UBT7 734 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TMEM191CA6NGB0 347 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 LGR5O75473 907 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 MCL1Q07820 350 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TNFAIP8L3Q5GJ75 292 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 WHRNQ9P202 907 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 PARP2Q9UGN5 583 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 EVPLQ92817 2033 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 PROZP22891 400 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 ASPAP45381 313 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 MMP13P45452 471 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 CALCOCO2Q13137 446 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 KYNUQ16719 465 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 KAZNQ674X7 775 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 KAT2BQ92831 832 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
USP10-202ENST00000540269 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
USP10-202ENST00000540269 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 RGS16O15492 202 aaPredicted RBP13.13□□□□□ -0.31
USP10-202ENST00000540269 PSTPIP1O43586 416 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 ZSCAN5DPP0CG00 497 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 ETS1P14921 441 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 CDH8P55286 799 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 MAPK6Q16659 721 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 XPO6Q96QU8 1125 aaKnown RBP13.13□□□□□ -0.31
USP10-202ENST00000540269 NIF3L1Q9GZT8 377 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SBF1O95248 1867 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
USP10-202ENST00000540269 CXCL8P10145 99 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 CETPP11597 493 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 EFNA5P52803 228 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 IFT88Q13099 833 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SLMAPQ14BN4 828 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SULF1Q8IWU6 871 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SNF8Q96H20 258 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
USP10-202ENST00000540269 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SIX4Q9UIU6 781 aa13.13□□□□□ -0.31
USP10-202ENST00000540269 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP10-202ENST00000540269 ANK1P16157 1881 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 DICER1Q9UPY3 1922 aaKnown RBP13.12□□□□□ -0.31
USP10-202ENST00000540269 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 DRD4P21917 467 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.12□□□□□ -0.31
USP10-202ENST00000540269 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
USP10-202ENST00000540269 RUNDC3BQ96NL0 473 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 TMEM109Q9BVC6 243 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
USP10-202ENST00000540269 PARVAQ9NVD7 372 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
USP10-202ENST00000540269 HMGXB4Q9UGU5 601 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 DNPEPQ9ULA0 475 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 GPR25O00155 361 aa13.12□□□□□ -0.31
USP10-202ENST00000540269 GBP1P32455 592 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms