RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ATRNL1Q5VV63 1379 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 DHX15O43143 795 aaKnown RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 EIF2AK2P19525 551 aaKnown RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 KPNB1Q14974 876 aaKnown RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CCDC6Q16204 474 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 PARP6Q2NL67 630 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CLNKQ7Z7G1 428 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 ASAP3Q8TDY4 903 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 NRG4Q8WWG1 115 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 DNAJC9Q8WXX5 260 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CFAP57Q96MR6 1250 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CADM1Q9BY67 442 aaKnown RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 NMRK1Q9NWW6 199 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 KCND2Q9NZV8 630 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 FOCADQ5VW36 1801 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 F8VP50 259 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 PROSCO94903 275 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 ACOT2P49753 483 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 GPC3P51654 580 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 CCNG1P51959 295 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 RCN1Q15293 331 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 MSS51Q4VC12 460 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 MDH1BQ5I0G3 518 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 DDX50Q9BQ39 737 aaKnown RBP14.16□□□□□ -0.14
HDAC4-214ENST00000535493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.16□□□□□ -0.144e-9■■■■■ 42.5
HDAC4-214ENST00000535493 HEY2Q9UBP5 337 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 IVNS1ABPQ9Y6Y0 642 aa14.16□□□□□ -0.14
HDAC4-214ENST00000535493 POLRMTO00411 1230 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 HNRNPDLO14979 420 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 GNAT1P11488 350 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 ATP6V1C1P21283 382 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 QARSP47897 775 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 SARNPP82979 210 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 CAV1Q03135 178 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 ZNF394Q53GI3 561 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 ANKRD22Q5VYY1 191 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 RHOT1Q8IXI2 618 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM161BQ8NDZ6 487 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 TCP10LQ8TDR4 215 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 WDR60Q8WVS4 1066 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 SGK1O00141 431 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 DCTN3O75935 186 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 LUC7L3O95232 432 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 TNNI1P19237 187 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 GPX6P59796 221 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 SEPT7Q16181 437 aaKnown RBP14.15□□□□□ -0.14
HDAC4-214ENST00000535493 SMTNL2Q2TAL5 461 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 WDR72Q3MJ13 1102 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 BICD1Q96G01 975 aa14.15□□□□□ -0.14
HDAC4-214ENST00000535493 LIASO43766 372 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 TYROBPO43914 113 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 SERPINB3P29508 390 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 NR1H3Q13133 447 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 CTC1Q2NKJ3 1217 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 ACSBG2Q5FVE4 666 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 ASTN2O75129 1339 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 DNALI1O14645 258 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MAGEB2O15479 319 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MARK3P27448 753 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MAN1A1P33908 653 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 GDF10P55107 478 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MRPS9P82933 396 aaKnown RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 CENPCQ03188 943 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 RCN2Q14257 317 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MYBPC2Q14324 1141 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 KCNT1Q5JUK3 1230 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 SNX30Q5VWJ9 437 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 C4orf50Q6ZRC1 276 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 SYDE1Q6ZW31 735 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 TSC22D3Q99576 134 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 KMT5AQ9NQR1 393 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 C1orf112Q9NSG2 853 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 PTPRJQ12913 1337 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 TCRBV7S3A2A0A539 114 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 CAPN9O14815 690 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 WFS1O76024 890 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 NEFHP12036 1026 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 PTPN4P29074 926 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 CYP24A1Q07973 514 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 FNBP1LQ5T0N5 605 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 MON1BQ7L1V2 547 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 ZC3H18Q86VM9 953 aaKnown RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 LMNTD2Q8IXW0 634 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 SCG3Q8WXD2 468 aaKnown RBP14.14□□□□□ -0.15
HDAC4-214ENST00000535493 ACTL7BQ9Y614 415 aa14.14□□□□□ -0.15
HDAC4-214ENST00000535493 LRRD1A4D1F6 860 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TBX10O75333 385 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 KRT1P04264 644 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 ZBTB16Q05516 673 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms