RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	CXCL10	P02778	98 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	NTRK1	P04629	796 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	KRT18	P05783	430 aa	Known RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	ASGR2	P07307	311 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	EEF2	P13639	858 aa	Known RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	PTGS1	P23219	599 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	NBL1	P41271	181 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	ID4	P47928	161 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	SLC6A11	P48066	632 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	EPHB1	P54762	984 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	PPP2R2A	P63151	447 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	DEFB103A	P81534	67 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	ZXDA	P98168	799 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	BRD3	Q15059	726 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	ALDH1L2	Q3SY69	923 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	C2orf27A	Q580R0	203 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	CCDC158	Q5M9N0	1113 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	TTC39A	Q5SRH9	613 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	FAM83B	Q5T0W9	1011 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	TMEM63B	Q5T3F8	832 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	NFRKB	Q6P4R8	1299 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	TMCO2	Q7Z6W1	182 aa	Predicted RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	LILRB2	Q8N423	598 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	CPA5	Q8WXQ8	436 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	SEC14L1	Q92503	715 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	ZNF669	Q96BR6	464 aa	Predicted RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	MEIS3	Q99687	375 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	SLF1	Q9BQI6	1058 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	FTO	Q9C0B1	505 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	KANSL2	Q9H9L4	492 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	FBXO40	Q9UH90	709 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	LCT	P09848	1927 aa		6.68	□□□□□ -1.34
PUM1-222	ENST00000531867	RIF1	Q5UIP0	2472 aa	Known RBP	6.68	□□□□□ -1.34
PUM1-222	ENST00000531867		A0A1W2PQU0	124 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	PRR23A	A6NEV1	266 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	ASB14	A6NK59	587 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	C22orf46	C9J442	243 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867		H3BNC9	293 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	PDPK1	O15530	556 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MBTPS2	O43462	519 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	KRT37	O76014	449 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	PML	P29590	882 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	AVPR2	P30518	371 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	GNAL	P38405	381 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	OAZ1	P54368	228 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	HTRA4	P83105	476 aa	Predicted RBP	6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	CNTN2	Q02246	1040 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	BFSP2	Q13515	415 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	TCTN1	Q2MV58	587 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	DUSP28	Q4G0W2	176 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	TCEAL5	Q5H9L2	206 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	SLC35F1	Q5T1Q4	408 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	B3GNT8	Q7Z7M8	397 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	CCDC103	Q8IW40	242 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	SUGP1	Q8IWZ8	645 aa	Known RBP	6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	ANKRD35	Q8N283	1001 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	TMEM145	Q8NBT3	493 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	ATOH1	Q92858	354 aa	Predicted RBP	6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	CTAGE1	Q96RT6	745 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	C17orf80	Q9BSJ5	609 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	FSD1	Q9BTV5	496 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MAF1	Q9H063	256 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	SLC38A10	Q9HBR0	1119 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	PDGFC	Q9NRA1	345 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MCM9	Q9NXL9	1143 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MTUS1	Q9ULD2	1270 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	COA3	Q9Y2R0	106 aa	Predicted RBP	6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	FPGT-TNNI3K	V9GXZ4	949 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867		X6R8D5	127 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MICAL3	Q7RTP6	2002 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	TRIO	O75962	3097 aa		6.67	□□□□□ -1.34
PUM1-222	ENST00000531867	MYO7A	Q13402	2215 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	RALGAPA2	Q2PPJ7	1873 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	NLRC5	Q86WI3	1866 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	C5orf42	Q9H799	3197 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	LOC730098	B7Z3J9	87 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867		H7BY64	318 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	EFCAB14	O75071	495 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	IDH1	O75874	414 aa	Known RBP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	CAPNS1	P04632	268 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	INHBB	P09529	407 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	CYP2D6	P10635	497 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	PTMS	P20962	102 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	LIMS1	P48059	325 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	VCP	P55072	806 aa	Known RBP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	SIGLEC14	Q08ET2	396 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	G3BP1	Q13283	466 aa	Known RBP eCLIP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	SMAD4	Q13485	552 aa	Known RBP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	PPP2R5A	Q15172	486 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	SF1	Q15637	639 aa	Known RBP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	PRSS53	Q2L4Q9	553 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	EPC2	Q52LR7	807 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	TTLL10	Q6ZVT0	673 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	LRRC47	Q8N1G4	583 aa	Known RBP	6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	LINC01356	Q8N9X3	169 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	CAGE1	Q8TC20	777 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	AFAP1L1	Q8TED9	768 aa		6.66	□□□□□ -1.34
PUM1-222	ENST00000531867	THAP3	Q8WTV1	239 aa	Predicted RBP	6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms