RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 KIF12Q96FN5 646 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 SNX27Q96L92 541 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 HINFPQ9BQA5 517 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 UPF3AQ9H1J1 476 aaKnown RBP20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 DPP3Q9NY33 737 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 SNTG2Q9NY99 539 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 PCDHGC3Q9UN70 934 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 KRIT1O00522 736 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 STAU1O95793 577 aaKnown RBP20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 FGGP02679 453 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 GNAT1P11488 350 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 MMP8P22894 467 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 CTNNA2P26232 953 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 AXLP30530 894 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 CDH8P55286 799 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 ZNF211Q13398 564 aaPredicted RBP20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 PHLDB2Q86SQ0 1253 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 HPDLQ96IR7 371 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 AGAP1Q9UPQ3 857 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 DERAQ9Y315 318 aa20.59■□□□□ 0.89
TM9SF1-203ENST00000524835 SCN10AQ9Y5Y9 1956 aa20.58■□□□□ 0.89
TM9SF1-203ENST00000524835 CCDC188H7C350 402 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 SPOPO43791 374 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 ITGA4P13612 1032 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 CDH5P33151 784 aaPredicted RBP20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 RAD23BP54727 409 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 MAP9Q49MG5 647 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 GNASQ5JWF2 1037 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 LIN9Q5TKA1 542 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 PLEKHA7Q6IQ23 1121 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 KLHL7Q8IXQ5 586 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 GSPT2Q8IYD1 628 aaKnown RBP20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 WHAMMQ8TF30 809 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 ZMAT2Q96NC0 199 aaKnown RBP20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 CYP3A43Q9HB55 503 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 HES2Q9Y543 173 aa20.58■□□□□ 0.88
TM9SF1-203ENST00000524835 GLI1P08151 1106 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 TNFRSF8P28908 595 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 PLA2G4AP47712 749 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 CRYBB1P53674 252 aaPredicted RBP20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 RBP5P82980 135 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 TRIM32Q13049 653 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 MAMLD1Q13495 774 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 NME8Q8N427 588 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 C1orf131Q8NDD1 294 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 ZNF518BQ9C0D4 1074 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 NXF3Q9H4D5 531 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 PCDHA3Q9Y5H8 950 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 CCDC66A2RUB6 948 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 RAD51CO43502 376 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 CILPO75339 1184 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 PGK1P00558 417 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 PAEPP09466 180 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 NKX3-2P78367 333 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 NOGQ13253 232 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 ZBTB6Q15916 424 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 ALKAL1Q6UXT8 129 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 HDXQ7Z353 690 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 KRT222Q8N1A0 295 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 WDTC1Q8N5D0 677 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 TMEM35BQ8NCS4 154 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 TWNKQ96RR1 684 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 HMGXB4Q9UGU5 601 aa20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 PIN4Q9Y237 131 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-203ENST00000524835 SEPT4O43236 478 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 HEXIM1O94992 359 aaKnown RBP20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 P4HA1P13674 534 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 AADACL2Q6P093 401 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 TAF2Q6P1X5 1199 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 CXCL17Q6UXB2 119 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 SLC4A11Q8NBS3 891 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 AENQ8WTP8 325 aaKnown RBP20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 ELOVL4Q9GZR5 314 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 DDX47Q9H0S4 455 aaKnown RBP20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 MRPL47Q9HD33 250 aaKnown RBP20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 GDF3Q9NR23 364 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 CNTN3Q9P232 1028 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 NR2E1Q9Y466 385 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 SCINQ9Y6U3 715 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 CASP8AP2Q9UKL3 1982 aa20.56■□□□□ 0.88
TM9SF1-203ENST00000524835 TRIP11Q15643 1979 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 ZSCAN5CA6NGD5 496 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 SART1O43290 800 aaKnown RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 AOC2O75106 756 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 RECQL4O94761 1208 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 YARSP54577 528 aaKnown RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 NAP1L3Q99457 506 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 GTF2IRD1Q9UHL9 959 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 TCRBV5S1A1TA0A578 114 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 MYO1FO00160 1098 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 INCA1Q0VD86 236 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 CASP8Q14790 479 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 CLUL1Q15846 466 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 NBPF20Q3BBV1 942 aa20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-203ENST00000524835 TUBGCP4Q9UGJ1 667 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms