RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ATP9AO75110 1047 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 FGAP02671 866 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 LAG3P18627 525 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 MARK3P27448 753 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 CCND2P30279 289 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 TCF7P36402 384 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-210ENST00000522843 HAND2P61296 217 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 ETF1P62495 437 aaKnown RBP7.61□□□□□ -1.19
SDCBP-210ENST00000522843 PAK2Q13177 524 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 NEDD9Q14511 834 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 ACAP1Q15027 740 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 ALX1Q15699 326 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 MEI1Q5TIA1 1274 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 KCNT2Q6UVM3 1135 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 RSPH3Q86UC2 560 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 TBC1D10CQ8IV04 446 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 C1orf210Q8IVY1 113 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 SLC22A17Q8WUG5 538 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 MTMR8Q96EF0 704 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 CASD1Q96PB1 797 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 PCYT2Q99447 389 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 CELF4Q9BZC1 486 aaKnown RBP7.61□□□□□ -1.19
SDCBP-210ENST00000522843 ADAMTS10Q9H324 1103 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 TBC1D17Q9HA65 648 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 RGS18Q9NS28 235 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 RTEL1Q9NZ71 1219 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 WNT16Q9UBV4 365 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 PARP2Q9UGN5 583 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 CA14Q9ULX7 337 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 NOC2LQ9Y3T9 749 aaKnown RBP7.61□□□□□ -1.19
SDCBP-210ENST00000522843 PCDHB7Q9Y5E2 793 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 WDFY3Q8IZQ1 3526 aa7.61□□□□□ -1.19
SDCBP-210ENST00000522843 NEDD4P46934 1319 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 KDM3AQ9Y4C1 1321 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 DOCK8Q8NF50 2099 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 INSRRP14616 1297 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 IGBP1P78318 339 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 FAM189BP81408 668 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 ATAT1Q5SQI0 421 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 ZC3H14Q6PJT7 736 aaKnown RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 TMC5Q6UXY8 1006 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 GPR149Q86SP6 731 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 PIWIL2Q8TC59 973 aaKnown RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 OTUD7AQ8TE49 926 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 TRAPPC12Q8WVT3 735 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 AUTS2Q8WXX7 1259 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 CHAMP1Q96JM3 812 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 ADAM2Q99965 735 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 RTKNQ9BST9 563 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 AMNQ9BXJ7 453 aa7.6□□□□□ -1.19
SDCBP-210ENST00000522843 MAP3K20Q9NYL2 800 aaKnown RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 PUF60Q9UHX1 559 aaKnown RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 SMG1Q96Q15 3661 aaKnown RBP7.6□□□□□ -1.19
SDCBP-210ENST00000522843 BAZ2BQ9UIF8 2168 aaKnown RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 FIBPO43427 364 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 KINO60870 393 aaKnown RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 CST3P01034 146 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 KCNA2P16389 499 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SDHBP21912 280 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SEPT6Q14141 434 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SMC1AQ14683 1233 aaKnown RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 WIPI1Q5MNZ9 446 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 PRAMEF13Q5VWM6 474 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 XRRA1Q6P2D8 792 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SLC24A5Q71RS6 500 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 TMEM173Q86WV6 379 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 DGKHQ86XP1 1220 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SLC39A11Q8N1S5 342 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SLC44A3Q8N4M1 653 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 BAHD1Q8TBE0 780 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-210ENST00000522843 SENP7Q9BQF6 1050 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 TMEM161AQ9NX61 479 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 NCDNQ9UBB6 729 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 PCDHA1Q9Y5I3 950 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 PATJQ8NI35 1801 aa7.59□□□□□ -1.19
SDCBP-210ENST00000522843 LAMA4Q16363 1823 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 PRR5-ARHGAP8B1AHC4 643 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 NT5C1B-RDH14C9J2C7 533 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 GCOM1H8Y6P7 765 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-210ENST00000522843 CXCL14O95715 111 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 POLR2MP0CAP2 368 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 TRHRP34981 398 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ARHGAP8P85298 464 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 LMNB2Q03252 620 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 WTAPQ15007 396 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 PLCB4Q15147 1175 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 GNPTABQ3T906 1256 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ASPRV1Q53RT3 343 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 CLLU1OSQ5K130 101 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 CCDC149Q6ZUS6 474 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 OTOP3Q7RTS5 596 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 CDH24Q86UP0 819 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 CREG2Q8IUH2 290 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 NELL1Q92832 810 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ZNF558Q96NG5 402 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 VN1R3Q9BXE9 311 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 RNF32Q9H0A6 362 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 TMEM117Q9H0C3 514 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms