RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 ITGB3P05106 788 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 AKAP5P24588 427 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 RFC2P35250 354 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 DSC3Q14574 896 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SLC18A3Q16572 532 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZNF699Q32M78 642 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TMEM31Q5JXX7 168 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KIAA1328Q86T90 577 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 PHOSPHO2Q8TCD6 241 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ATRIPQ8WXE1 791 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZMAT2Q96NC0 199 aaKnown RBP16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TSPAN18Q96SJ8 248 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ARID3AQ99856 593 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CXCL16Q9H2A7 254 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 DPP3Q9NY33 737 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 PARP2Q9UGN5 583 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
SH3PXD2B-203ENST00000519643 A0A087X0T9 212 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CYP26A1O43174 497 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CLSTN1O94985 981 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KRT19P08727 400 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 FAM228BP0C875 321 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KCNE1P15382 129 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ACO1P21399 889 aaKnown RBP16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ATICP31939 592 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 MAGEA1P43355 309 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 GUCY2FP51841 1108 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 VAV2P52735 878 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZBTB6Q15916 424 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZNF662Q6ZS27 426 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 HACE1Q8IYU2 909 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TMEM130Q8N3G9 435 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 HLA-CQ95604 372 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CD320Q9NPF0 282 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 FAM105AQ9NUU6 356 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 HCN4Q9Y3Q4 1203 aa16.17■□□□□ 0.18
SH3PXD2B-203ENST00000519643 LCHNA4D1U4 455 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 MGEA5O60502 916 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KRT5P13647 590 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TNNT1P13805 278 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 POLR2BP30876 1174 aaKnown RBP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 RBP5P82980 135 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 BFSP2Q13515 415 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 MRPL10Q7Z7H8 261 aaKnown RBP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 UBR7Q8N806 425 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 FAXDC2Q96IV6 333 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 AGPAT1Q99943 283 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TRAIPQ9BWF2 469 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 VRTNQ9H8Y1 702 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 LZTFL1Q9NQ48 299 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 KLK14Q9P0G3 267 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 UBQLN1Q9UMX0 589 aaKnown RBP16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 NENFQ9UMX5 172 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 AGAP1Q9UPQ3 857 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 CNTN6Q9UQ52 1028 aa16.16■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SMIM28A0A1B0GU29 152 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 RCCD1A6NED2 376 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 FAM86C2PA6NEL3 165 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TUBB4AP04350 444 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ITGA4P13612 1032 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SELPP16109 830 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TNFAIP3P21580 790 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 RAB27AP51159 221 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 GPNMBQ14956 572 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 DNTTIP2Q5QJE6 756 aaKnown RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 NOP9Q86U38 636 aaKnown RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SLC30A5Q8TAD4 765 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 LNX1Q8TBB1 728 aaPredicted RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 EPS8L1Q8TE68 723 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 C18orf25Q96B23 403 aaPredicted RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 TUBGCP4Q9UGJ1 667 aa16.15■□□□□ 0.18
SH3PXD2B-203ENST00000519643 NAGPAQ9UK23 515 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms