RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 OR52Z1P0C646 297 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 PEX3P56589 373 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 DUSP4Q13115 394 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 GPR17Q13304 367 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 CCDC6Q16204 474 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 GAREM2Q75VX8 874 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 KBTBD6Q86V97 674 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 ZFYVE19Q96K21 471 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 LRPAP1P30533 357 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 MPLP40238 635 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 DMP1Q13316 513 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 TRIM29Q14134 588 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 PTPAQ15257 358 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 ECM1Q16610 540 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 ITPRIPL2Q3MIP1 535 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 DAW1Q8N136 415 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 BPIFB1Q8TDL5 484 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 PGLYRP2Q96PD5 576 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 TMEM209Q96SK2 561 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 VPS45Q9NRW7 570 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 HSFX1Q9UBD0 423 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.25
TRAPPC9-204ENST00000518723 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.26
TRAPPC9-204ENST00000518723 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.26
TRAPPC9-204ENST00000518723 SPAG17Q6Q759 2223 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 ATG13O75143 517 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 TOM1L1O75674 476 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 GABRR2P28476 465 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 TNK2Q07912 1038 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 MYBPC2Q14324 1141 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 ARHGAP15Q53QZ3 475 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 TMEM196Q5HYL7 178 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 GPIHBP1Q8IV16 184 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 CAMKK1Q8N5S9 505 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 KDF1Q8NAX2 398 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 DRC1Q96MC2 740 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 TASP1Q9H6P5 420 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 PLEKHA5Q9HAU0 1116 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
TRAPPC9-204ENST00000518723 MTMR11A4FU01 709 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 TYMPP19971 482 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 CYP3A5P20815 502 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 MCM2P49736 904 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 GRSF1Q12849 480 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 MAPK7Q13164 816 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 ME3Q16798 604 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 RNF43Q68DV7 783 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 UNQ6494/PRO21346Q6UXR6 183 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 USP37Q86T82 979 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 ITIH5Q86UX2 942 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZBTB45Q96K62 511 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 NTPCRQ9BSD7 190 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 THG1LQ9NWX6 298 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 WASF3Q9UPY6 502 aa13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-204ENST00000518723 TTC26A0AVF1 554 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 JAK2O60674 1132 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 HIP1RO75146 1068 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 CDC25CP30307 473 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 MCL1Q07820 350 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZNF174Q15697 407 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 PLK5Q496M5 336 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 OVOS1Q6IE37 1185 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms