RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 YY1P25490 414 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 SNX16P57768 344 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 NOMO3P69849 1222 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
RACK1-229ENST00000513027 MGAT3Q09327 533 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 TRIM32Q13049 653 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
RACK1-229ENST00000513027 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 PALB2Q86YC2 1186 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 TMEM40Q8WWA1 233 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 ZNF653Q96CK0 615 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
RACK1-229ENST00000513027 CARD9Q9H257 536 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 TAS2R14Q9NYV8 317 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 GIT1Q9Y2X7 761 aa13.22□□□□□ -0.29
RACK1-229ENST00000513027 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 BUB1BO60566 1050 aaPredicted RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 INHAP05111 366 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 HSPA6P17066 643 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 FGFR4P22455 802 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 LRPAP1P30533 357 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 MMGT1Q8N4V1 131 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 SLC43A3Q8NBI5 491 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 BEGAINQ9BUH8 593 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.295e-14■■■■□ 20.7
RACK1-229ENST00000513027 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 GDAP2Q9NXN4 497 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 ADAM22Q9P0K1 906 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 CNOT8Q9UFF9 292 aaKnown RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.29
RACK1-229ENST00000513027 IPPQ9Y573 584 aa13.21□□□□□ -0.29
RACK1-229ENST00000513027 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 CCDC188H7C350 402 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 MYO1FO00160 1098 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 ERLIN1O75477 346 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 FTCDO95954 541 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 CHRNA1P02708 482 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 WEE2P0C1S8 567 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 MMP8P22894 467 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 GSCP56915 257 aaPredicted RBP13.2□□□□□ -0.3
RACK1-229ENST00000513027 BRD3Q15059 726 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 ELF2Q15723 593 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 CNGA2Q16280 664 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 SV2CQ496J9 727 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 TEX35Q5T0J7 233 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 PLEKHA7Q6IQ23 1121 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 SPATA18Q8TC71 538 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
RACK1-229ENST00000513027 ARHGEF26Q96DR7 871 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
RACK1-229ENST00000513027 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 FAM105AQ9NUU6 356 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 PARP2Q9UGN5 583 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
RACK1-229ENST00000513027 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
RACK1-229ENST00000513027 TRIP12Q14669 1992 aaPredicted RBP13.2□□□□□ -0.3
RACK1-229ENST00000513027 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 PIRO00625 290 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 ATP8B1O43520 1251 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 ITGA4P13612 1032 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 CD58P19256 250 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 CTNNA2P26232 953 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
RACK1-229ENST00000513027 MAN1A1P33908 653 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 THPOP40225 353 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 RAD23BP54727 409 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 PAK2Q13177 524 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 SGO2Q562F6 1265 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 NAA35Q5VZE5 725 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 LHX8Q68G74 356 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 WDR93Q6P2C0 686 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
RACK1-229ENST00000513027 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms