RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 RBM28Q9NW13 759 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 ZNHIT6Q9NWK9 470 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 SUN2Q9UH99 717 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 SCAF8Q9UPN6 1271 aaKnown RBP3.61□□□□□ -1.83
PVT1-202ENST00000512617 PIAS3Q9Y6X2 628 aa3.61□□□□□ -1.83
PVT1-202ENST00000512617 ADGRL1O94910 1474 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NEO1Q92859 1461 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.6□□□□□ -1.83
PVT1-202ENST00000512617 ZBTB42B2RXF5 422 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 H0YAE9 185 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ZNF561-AS1K7EIQ3 104 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 UBXN8O00124 270 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ASAP2O43150 1006 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 EFSO43281 561 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 TBX10O75333 385 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ACTL6BO94805 426 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SASH1O94885 1247 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 KIF20AO95235 890 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 GGPS1O95749 300 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SNRPA1P09661 255 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 SLFN14P0C7P3 912 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CYP2A6P11509 494 aaPredicted RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 NPR1P16066 1061 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 RHOQP17081 205 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 BTF3P20290 206 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 TGM1P22735 817 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PSMA4P25789 261 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 TPP2P29144 1249 aaPredicted RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 PAFAH1B1P43034 410 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 MATR3P43243 847 aaKnown RBP eCLIP3.6□□□□□ -1.834e-7■■■■□ 19.3
PVT1-202ENST00000512617 ARL4DP49703 201 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SULT1E1P49888 294 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CCT4P50991 539 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 GPC3P51654 580 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 RARSP54136 660 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 EMP3P54852 163 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 JAM2P57087 298 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SLC26A5P58743 744 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 RPS16P62249 146 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 AP2B1P63010 937 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NKX6-1P78426 367 aaPredicted RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 POU4F1Q01851 419 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 DSC2Q02487 901 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 MECOMQ03112 1051 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 RING1Q06587 406 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ACTN3Q08043 901 aaPredicted RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 C19orf57Q0VDD7 668 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NOGQ13253 232 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SMAD4Q13485 552 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 NEUROD1Q13562 356 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NFE2L1Q14494 772 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 GPR19Q15760 415 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PCSK7Q16549 785 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SHROOM1Q2M3G4 852 aaPredicted RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 ARHGAP15Q53QZ3 475 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PITRM1Q5JRX3 1037 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PRAMEF14Q5SWL7 426 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CCDC183Q5T5S1 534 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PRAMEF13Q5VWM6 474 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 FYB2Q5VWT5 728 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 TAF2Q6P1X5 1199 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 FIGNL1Q6PIW4 674 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SLC2A7Q6PXP3 512 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 HHIPL2Q6UWX4 724 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 LYSMD3Q7Z3D4 306 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 VSIG10LQ86VR7 867 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 OSTM1Q86WC4 334 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 METTL23Q86XA0 190 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CCDC103Q8IW40 242 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 TMEM57Q8N5G2 664 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SH2D3CQ8N5H7 860 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CCDC150Q8NCX0 1101 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 Q8NFD4 153 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 KIAA1524Q8TCG1 905 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 XAGE3Q8WTP9 111 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ANKRD49Q8WVL7 239 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 MARVELD3Q96A59 401 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 VPS33AQ96AX1 596 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SDCCAG3Q96C92 435 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 CNDP1Q96KN2 507 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SNX22Q96L94 193 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 MFSD14AQ96MC6 490 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 DACH2Q96NX9 599 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 ATP6V0BQ99437 205 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 KCNJ15Q99712 375 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NOL10Q9BSC4 688 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 FTOQ9C0B1 505 aaKnown RBP eCLIP3.6□□□□□ -1.83
PVT1-202ENST00000512617 NDST4Q9H3R1 872 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 NOD2Q9HC29 1040 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
PVT1-202ENST00000512617 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 SNTG1Q9NSN8 517 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 GFOD1Q9NXC2 390 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 STK32BQ9NY57 414 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 PRR13Q9NZ81 148 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 AIPL1Q9NZN9 384 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 COL20A1Q9P218 1284 aa3.6□□□□□ -1.83
PVT1-202ENST00000512617 TBC1D14Q9P2M4 693 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms