RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SLC38A8A6NNN8 435 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 CLDN3O15551 220 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 TOM1L1O75674 476 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.684e-7■■■□□ 15.3
NEDD9-210ENST00000505589 CCT6AP40227 531 aaKnown RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 PEX3P56589 373 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 ANAPC15P60006 121 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 SOX4Q06945 474 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 DUSP4Q13115 394 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 PON2Q15165 354 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 DNAJB7Q7Z6W7 309 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 SHKBP1Q8TBC3 707 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 C2orf15Q8WU43 125 aaKnown RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 CDT1Q9H211 546 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 TASP1Q9H6P5 420 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 GJB4Q9NTQ9 266 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 RBM12Q9NTZ6 932 aaKnown RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 UBQLN1Q9UMX0 589 aaKnown RBP10.79□□□□□ -0.68
NEDD9-210ENST00000505589 YIPF1Q9Y548 306 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 VWA8A3KMH1 1905 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
NEDD9-210ENST00000505589 TRDMT1O14717 391 aaKnown RBP10.78□□□□□ -0.68
NEDD9-210ENST00000505589 CLTAP09496 248 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 GJA1P17302 382 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 TYMPP19971 482 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 PROZP22891 400 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 GABRR2P28476 465 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 LRPAP1P30533 357 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 ABCD1P33897 745 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 AVPR1AP37288 418 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 NPTX2P47972 431 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 TRAPPC10P48553 1259 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 MCM2P49736 904 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.689e-11■■□□□ 12.4
NEDD9-210ENST00000505589 GPR158Q5T848 1215 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 KRT79Q5XKE5 535 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-210ENST00000505589 ZPBP2Q6X784 338 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 CD302Q8IX05 232 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 ZMAT2Q96NC0 199 aaKnown RBP10.78□□□□□ -0.68
NEDD9-210ENST00000505589 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
NEDD9-210ENST00000505589 LRRC3Q9BY71 257 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 LRWD1Q9UFC0 647 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 DSEQ9UL01 958 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
NEDD9-210ENST00000505589 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 USP20Q9Y2K6 914 aa10.78□□□□□ -0.68
NEDD9-210ENST00000505589 CAVIN2O95810 425 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 CEACAM1P13688 526 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 MPLP40238 635 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 MATR3P43243 847 aaKnown RBP eCLIP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 PPP2R3AQ06190 1150 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 NR1H3Q13133 447 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 SRSF5Q13243 272 aaKnown RBP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 RUNX3Q13761 415 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 SF3A2Q15428 464 aaKnown RBP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 TMEM196Q5HYL7 178 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 OVOS1Q6IE37 1185 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 METTL23Q86XA0 190 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 TMC8Q8IU68 726 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 CEP120Q8N960 986 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 KIFC3Q9BVG8 833 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 TMEM60Q9H2L4 133 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 FOXP1Q9H334 677 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-210ENST00000505589 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 ARHGAP28Q9P2N2 729 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 EBF1Q9UH73 591 aa10.77□□□□□ -0.69
NEDD9-210ENST00000505589 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 LAD1O00515 517 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 CTDNEP1O95476 244 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 EDN1P05305 212 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 ODC1P11926 461 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 IGFBP6P24592 240 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 DPP6P42658 865 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 SOX9P48436 509 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 BFSP1Q12934 665 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 SLC10A6Q3KNW5 377 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 USP39Q53GS9 565 aaKnown RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 TXNDC11Q6PKC3 985 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 UNQ6494/PRO21346Q6UXR6 183 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 Q6ZS52 159 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 SYT13Q7L8C5 426 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 KBTBD6Q86V97 674 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 ACDQ96AP0 544 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 C18orf25Q96B23 403 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 PGLYRP2Q96PD5 576 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms