RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 GTF2F1P35269 517 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 THPOP40225 353 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ASPAP45381 313 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 PDE6CP51160 858 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 YARSP54577 528 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 BPIFB4P59827 614 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 AMPD2Q01433 879 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ZBTB6Q15916 424 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TRIM71Q2Q1W2 868 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 PAPD7Q5XG87 772 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 RBBP8NLQ8NC74 664 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 SMG8Q8ND04 991 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 LRRN4CLQ8ND94 238 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TRIM58Q8NG06 486 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 SH3TC2Q8TF17 1288 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TSC1Q92574 1164 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ARHGEF26Q96DR7 871 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TSEN34Q9BSV6 310 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 TRMT13Q9NUP7 481 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 DPP3Q9NY33 737 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 AGAP1Q9UPQ3 857 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 DERAQ9Y315 318 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 C2CD2Q9Y426 696 aa11.06□□□□□ -0.64
PDE4D-212ENST00000505453 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 GFRA3O60609 400 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 RTN2O75298 545 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 PALMO75781 387 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 RECQL4O94761 1208 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 GZMAP12544 262 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 CD58P19256 250 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 ABCB4P21439 1286 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
PDE4D-212ENST00000505453 ATICP31939 592 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 SLC19A1P41440 591 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 ZNF132P52740 706 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 RBP5P82980 135 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 PTK7Q13308 1070 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 ZNF667Q5HYK9 610 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 SCARA5Q6ZMJ2 495 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 Q6ZNB5 142 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 DNAJC5GQ8N7S2 189 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
PDE4D-212ENST00000505453 CARD6Q9BX69 1037 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 THAP2Q9H0W7 228 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 AGO3Q9H9G7 860 aaKnown RBP11.05□□□□□ -0.64
PDE4D-212ENST00000505453 CISHQ9NSE2 258 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 KLK14Q9P0G3 267 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 CNTN3Q9P232 1028 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 CDC23Q9UJX2 597 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 IPPQ9Y573 584 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 PCDHB2Q9Y5E7 798 aa11.05□□□□□ -0.64
PDE4D-212ENST00000505453 A0A0A6YYK5 440 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ANKRD62A6NC57 917 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 SPTLC1O15269 473 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 CTIFO43310 598 aaKnown RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 NCK2O43639 380 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 SRGAP2O75044 1071 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 TFRCP02786 760 aaKnown RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 NOP2P46087 812 aaKnown RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 RAP1GAPP47736 663 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 CDH8P55286 799 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 TUBB2AQ13885 445 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 XKR4Q5GH76 650 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 FAM26DQ5JW98 314 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ACAD10Q6JQN1 1059 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ZNF677Q86XU0 584 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 SLC43A3Q8NBI5 491 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ARRDC4Q8NCT1 418 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 GLT1D1Q96MS3 346 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 TUBB2BQ9BVA1 445 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDE4D-212ENST00000505453 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ERVK-5Q9HDB9 667 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 PRDM9Q9NQV7 894 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 ITGA11Q9UKX5 1188 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 JRKLQ9Y4A0 524 aa11.04□□□□□ -0.64
PDE4D-212ENST00000505453 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
PDE4D-212ENST00000505453 A0A1W2PQ45 241 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms