RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 CDY1Q9Y6F8 540 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 WNT6Q9Y6F9 365 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 KIF26AQ9ULI4 1882 aaPredicted RBP4.72□□□□□ -1.65
CPNE4-204ENST00000505331 OTOGQ6ZRI0 2925 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 PCNX2A6NKB5 2137 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 WDR81Q562E7 1941 aa4.72□□□□□ -1.65
CPNE4-204ENST00000505331 DOPEY2Q9Y3R5 2298 aa4.71□□□□□ -1.65
CPNE4-204ENST00000505331 F5P12259 2224 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 SDK1Q7Z5N4 2213 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ASCC3Q8N3C0 2202 aaKnown RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 A0A1B0GTW7 788 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 PIK3CDO00329 1044 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 PPFIA2O75334 1257 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 RFPL3O75679 317 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ABLIM3O94929 683 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 TPM2P07951 284 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ATF2P15336 505 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ATP4AP20648 1035 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 WEE1P30291 646 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 OXCT1P55809 520 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ERVPABLB-1P60509 514 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 NCAPHQ15003 741 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 HLA-BQ31612 363 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 INAVAQ3KP66 663 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CCDC178Q5BJE1 867 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 WDR45BQ5MNZ6 344 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 HES3Q5TGS1 186 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 SWSAP1Q6NVH7 229 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 MIS18BP1Q6P0N0 1132 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CCDC81Q6ZN84 652 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 ZNF410Q86VK4 478 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 SLC41A1Q8IVJ1 513 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CCDC60Q8IWA6 550 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 RGL4Q8IZJ4 473 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 USP33Q8TEY7 942 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 EZH1Q92800 747 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 FOXJ1Q92949 421 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CD101Q93033 1021 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 KIF1BPQ96EK5 621 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 GPATCH3Q96I76 525 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 HSPA12BQ96MM6 686 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 NIFKQ9BYG3 293 aaKnown RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 SLC25A18Q9H1K4 315 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 RWDD1Q9H446 243 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 KAT14Q9H8E8 782 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CYP4F11Q9HBI6 524 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 HPS4Q9NQG7 708 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 KCNH7Q9NS40 1196 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 GKN1Q9NS71 199 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 RYDENQ9NUL5 291 aaKnown RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 MIOSQ9NXC5 875 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 CHMP5Q9NZZ3 219 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 GMIPQ9P107 970 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 BTBD3Q9Y2F9 522 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 FNDC3AQ9Y2H6 1198 aaKnown RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 GIT1Q9Y2X7 761 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 MAFBQ9Y5Q3 323 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-204ENST00000505331 INSL5Q9Y5Q6 135 aa4.71□□□□□ -1.66
CPNE4-204ENST00000505331 A0A087WZ62 844 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 A0A1W2PRU2 124 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 OTOL1A6NHN0 477 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 KLRF2D3W0D1 207 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 DXOO77932 396 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 RECQL4O94761 1208 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 AGFG2O95081 481 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 KIF4AO95239 1232 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 CCNE2O96020 404 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 PCP11498 1178 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FGFR3P22607 806 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 U2AF2P26368 475 aaKnown RBP eCLIP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 KIF5BP33176 963 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 GJA4P35212 333 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 CASRP41180 1078 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 CLDN6P56747 220 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 MRPS21P82921 87 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 GRIK3Q13003 919 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 SF3A1Q15459 793 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 ARL13BQ3SXY8 428 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 HSF5Q4G112 596 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 UBXN11Q5T124 520 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 SLC8B1Q6J4K2 584 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FBXL19Q6PCT2 694 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 ANKS3Q6ZW76 656 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 HOMER1Q86YM7 354 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 GPIHBP1Q8IV16 184 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 PGBD3Q8N328 593 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 SMG8Q8ND04 991 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 PI4K2BQ8TCG2 481 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 HASPINQ8TF76 798 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 SSC4DQ8WTU2 575 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 RABGGTAQ92696 567 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 CCDC97Q96F63 343 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 ZNF419Q96HQ0 510 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FAM167AQ96KS9 214 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FAM20AQ96MK3 541 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 ZFP42Q96MM3 310 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FDXACB1Q9BRP7 624 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 REPIN1Q9BWE0 567 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms