RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ATICP31939 592 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 KLK7P49862 253 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 MXI1P50539 228 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF132P52740 706 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 DSG1Q02413 1049 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 INCA1Q0VD86 236 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 NCOA4Q13772 614 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GRIN2CQ14957 1233 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RAB30Q15771 203 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PTPN21Q16825 1174 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 CCDC142Q17RM4 750 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GPR153Q6NV75 609 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TRIM65Q6PJ69 517 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 OSTM1Q86WC4 334 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ARHGEF19Q8IW93 802 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RNF214Q8ND24 703 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 EHBP1Q8NDI1 1231 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 BEST2Q8NFU1 509 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 OR10T2Q8NGX3 314 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FEZF2Q8TBJ5 459 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 URGCPQ8TCY9 931 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 HASPINQ8TF76 798 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 KAT5Q92993 513 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TIFAQ96CG3 184 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 B3GALT6Q96L58 329 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF558Q96NG5 402 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TWNKQ96RR1 684 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 NAT10Q9H0A0 1025 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GANQ9H2C0 597 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 RXFP1Q9HBX9 757 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 ALG13Q9NP73 1137 aaKnown RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TAB2Q9NYJ8 693 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 AGAP1Q9UPQ3 857 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PRG3Q9Y2Y8 225 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 PCDHGC5Q9Y5F6 944 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-208ENST00000504788 DENND4AQ7Z401 1863 aa5.32□□□□□ -1.56
LMNB1-208ENST00000504788 TRIOO75962 3097 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SMTNL1A8MU46 457 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 HIDE1A8MVS5 230 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SYN3O14994 580 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ADAM12O43184 909 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 TACC1O75410 805 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 FGFR1OPO95684 399 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 CTSAP10619 480 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 IBSPP21815 317 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 LMO2P25791 158 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 TKTP29401 623 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 OR1G1P47890 313 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ALDH7A1P49419 539 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 TAF6P49848 677 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 JAM2P57087 298 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 NOP14P78316 857 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 RBP5P82980 135 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 FANCCQ00597 558 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 GCNT1Q02742 428 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 UBE3AQ05086 875 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 CCDC40Q4G0X9 1142 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 DCAF17Q5H9S7 520 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PPP2R2DQ66LE6 453 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SLC8B1Q6J4K2 584 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 LILRA6Q6PI73 481 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PAQR9Q6ZVX9 377 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 DPH6Q7L8W6 267 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 LRRTM3Q86VH5 581 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PDCL2Q8N4E4 241 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 CACTINQ8WUQ7 758 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PIK3R5Q8WYR1 880 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 TAF4BQ92750 862 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 HPDLQ96IR7 371 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ANKRD36BP1Q96IX9 119 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SENP8Q96LD8 212 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 GUCD1Q96NT3 240 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SAMD11Q96NU1 681 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 FNBP1Q96RU3 617 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 CLSTN3Q9BQT9 956 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ZSWIM1Q9BR11 485 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 MRPL45Q9BRJ2 306 aaKnown RBP5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ZBED2Q9BTP6 218 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 HERC2P3Q9BVR0 1158 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 VPS16Q9H269 839 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF576Q9H609 170 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 CERS4Q9HA82 394 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 PLCB1Q9NQ66 1216 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM30AQ9NV96 361 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 SPG21Q9NZD8 308 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 HMGXB4Q9UGU5 601 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 FBXL5Q9UKA1 691 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 POLIQ9UNA4 740 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 ANAPC1Q9H1A4 1944 aa5.31□□□□□ -1.56
LMNB1-208ENST00000504788 A0A1W2PQC6 194 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 C2orf71A6NGG8 1288 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CILPO75339 1184 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ABLIM3O94929 683 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms