RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FAM124BQ9H5Z6 455 aaPredicted RBP14.83□□□□□ -0.04
CYSTM1-202ENST00000504227 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.04
CYSTM1-202ENST00000504227 RWDD3Q9Y3V2 267 aa14.83□□□□□ -0.04
CYSTM1-202ENST00000504227 AKR1B15C9JRZ8 316 aaPredicted RBP14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 F8W810 466 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 M0QZQ0 153 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 GYPCP04921 128 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 ITGB1P05556 798 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 ODC1P11926 461 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 CASP14P31944 242 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 PBX3P40426 434 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 ZBED6P86452 979 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 SOWAHAQ2M3V2 549 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 TSR1Q2NL82 804 aaKnown RBP14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 SMYD5Q6GMV2 418 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 METTL23Q86XA0 190 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 TDHQ8IZJ6 230 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 SLC39A11Q8N1S5 342 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 TMEM86AQ8N2M4 240 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 KAT5Q92993 513 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 TMEM169Q96HH4 297 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 IGSF21Q96ID5 467 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 KREMEN1Q96MU8 473 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 ARID3AQ99856 593 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 TTYH3Q9C0H2 523 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 NUCKS1Q9H1E3 243 aaKnown RBP14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 SNX25Q9H3E2 840 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 MSRAQ9UJ68 235 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 DSEQ9UL01 958 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 PCDHB8Q9UN66 801 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 SF3B1O75533 1304 aaKnown RBP eCLIP14.82□□□□□ -0.044e-6■■■■■ 95.6
CYSTM1-202ENST00000504227 PTPRSQ13332 1948 aa14.82□□□□□ -0.04
CYSTM1-202ENST00000504227 COL4A6Q14031 1691 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 LCHNA4D1U4 455 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 LINC01553A4QN01 128 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 I3L4J1 428 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 FOXN3O00409 490 aaPredicted RBP14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 TACC1O75410 805 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 KRT5P13647 590 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 CD58P19256 250 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 TYMPP19971 482 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 KRT9P35527 623 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 BMPR1AP36894 532 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 USP8P40818 1118 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 STAT1P42224 750 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 CDH8P55286 799 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 KRT17Q04695 432 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 RAB30Q15771 203 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 WSCD1Q658N2 575 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 FUT10Q6P4F1 479 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 CHRDL2Q6WN34 429 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 LIMS2Q7Z4I7 341 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 CNGA4Q8IV77 575 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 DNAI2Q9GZS0 605 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 CISHQ9NSE2 258 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 MARCH5Q9NX47 278 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 STK39Q9UEW8 545 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 AJAP1Q9UKB5 411 aaPredicted RBP14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 L1RE1Q9UN81 338 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 PCDHB4Q9Y5E5 795 aa14.81□□□□□ -0.04
CYSTM1-202ENST00000504227 F8VZ95 297 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SYN3O14994 580 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 CYP11A1P05108 521 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 CCDC172P0C7W6 258 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 MYOGP15173 224 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 ACO1P21399 889 aaKnown RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 WARSP23381 471 aaKnown RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 CTNNB1P35222 781 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SOX5P35711 763 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 GNL1P36915 607 aaPredicted RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 RAP1GAPP47736 663 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 LHX1P48742 406 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 FXR1P51114 621 aaKnown RBP eCLIP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 JAM2P57087 298 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 GSDMDP57764 484 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 FAM171A1Q5VUB5 890 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SFMBT2Q5VUG0 894 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 PDXDC1Q6P996 788 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 PDCL2Q8N4E4 241 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 OR8K1Q8NGG5 319 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SPATA18Q8TC71 538 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 BCL7CQ8WUZ0 217 aaPredicted RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SHC3Q92529 594 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 BAP1Q92560 729 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 MRPL45Q9BRJ2 306 aaKnown RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 GPR62Q9BZJ7 368 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 SDCBP2Q9H190 292 aa14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 BARX2Q9UMQ3 279 aaPredicted RBP14.8□□□□□ -0.04
CYSTM1-202ENST00000504227 LRRC53A6NM62 1247 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 RNF225M0QZC1 329 aaPredicted RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 CA3P07451 260 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 ADKP55263 362 aaKnown RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 INCA1Q0VD86 236 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 CCDC173Q0VFZ6 552 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 USP41Q3LFD5 358 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 TMEM270Q6UE05 265 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms