RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 FSD2A1L4K1 749 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 HUS1O60921 280 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 CD58P19256 250 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 TBXAS1P24557 533 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-227ENST00000498056 KRT17Q04695 432 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 KCNMA1Q12791 1236 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 CUL2Q13617 745 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 RAPGEF1Q13905 1077 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 GSE1Q14687 1217 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 FAM171A1Q5VUB5 890 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-227ENST00000498056 RRAGAQ7L523 313 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 LMO3Q8TAP4 145 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 TATDN2Q93075 761 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 PLVAPQ9BX97 442 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 VN1R3Q9BXE9 311 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 VRTNQ9H8Y1 702 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 SIX2Q9NPC8 291 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 PCDHB8Q9UN66 801 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 TIMM13Q9Y5L4 95 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-227ENST00000498056 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
CPNE1-227ENST00000498056 A0A1W2PQC6 194 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 C5orf67F2Z3F1 127 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 M0QZQ0 153 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 C2CD2LO14523 706 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 SOD2P04179 222 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 URODP06132 367 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 TRIM21P19474 475 aaKnown RBP14.53□□□□□ -0.08
CPNE1-227ENST00000498056 PAX3P23760 479 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 GLUD2P49448 558 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 ZNF75DP51815 510 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 ERVK-21P61565 698 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 NR1I3Q14994 352 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 ARHGAP44Q17R89 818 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 KIAA1841Q6NSI8 718 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 METTL23Q86XA0 190 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 PDCL2Q8N4E4 241 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 KAT5Q92993 513 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 GANQ9H2C0 597 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 ALG13Q9NP73 1137 aaKnown RBP14.53□□□□□ -0.08
CPNE1-227ENST00000498056 ENTPD7Q9NQZ7 604 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 AJAP1Q9UKB5 411 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-227ENST00000498056 MYO7AQ13402 2215 aa14.53□□□□□ -0.08
CPNE1-227ENST00000498056 CHD7Q9P2D1 2997 aa14.52□□□□□ -0.08
CPNE1-227ENST00000498056 SYN3O14994 580 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 EPHB6O15197 1021 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 WEE2P0C1S8 567 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 RFX1P22670 979 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 MFAP3P55082 362 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 POLR2FP61218 127 aaKnown RBP14.52□□□□□ -0.09
CPNE1-227ENST00000498056 YWHAHQ04917 246 aaPredicted RBP14.52□□□□□ -0.09
CPNE1-227ENST00000498056 GPM6BQ13491 265 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 USP41Q3LFD5 358 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 RTP2Q5QGT7 225 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 KLHDC7AQ5VTJ3 777 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 WSCD1Q658N2 575 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 OVOS1Q6IE37 1185 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 IQCEQ6IPM2 695 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 CACNA2D4Q7Z3S7 1137 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 DDX53Q86TM3 631 aaKnown RBP14.52□□□□□ -0.09
CPNE1-227ENST00000498056 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 TMEM86AQ8N2M4 240 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 TTPALQ9BTX7 342 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 BCO2Q9BYV7 579 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 SDCBP2Q9H190 292 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 SNX25Q9H3E2 840 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 UBE2TQ9NPD8 197 aaPredicted RBP14.52□□□□□ -0.09
CPNE1-227ENST00000498056 NLRC4Q9NPP4 1024 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 PLCB1Q9NQ66 1216 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 PUF60Q9UHX1 559 aaKnown RBP14.52□□□□□ -0.09
CPNE1-227ENST00000498056 DNAJC12Q9UKB3 198 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 DSEQ9UL01 958 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 CHD9Q3L8U1 2897 aa14.52□□□□□ -0.09
CPNE1-227ENST00000498056 ITIH6Q6UXX5 1313 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-227ENST00000498056 GRM6O15303 877 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 HCRTO43612 131 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 RB1P06400 928 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 UCHL3P15374 230 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 TYMPP19971 482 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 FGFR3P22607 806 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 PBX1P40424 430 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 MRE11P49959 708 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 CDH8P55286 799 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 YWHAEP62258 255 aaKnown RBP14.51□□□□□ -0.09
CPNE1-227ENST00000498056 PLCB3Q01970 1234 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 GCNT1Q02742 428 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 VARS2Q5ST30 1063 aaKnown RBP14.51□□□□□ -0.09
CPNE1-227ENST00000498056 PLPP4Q5VZY2 271 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 ZNF280DQ6N043 979 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 TAS1R1Q7RTX1 841 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 TMC6Q7Z403 805 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 RNF168Q8IYW5 571 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms