RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PTENP60484 403 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 TMED1Q13445 227 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 PEX26Q7Z412 305 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 UBLCP1Q8WVY7 318 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 CCDC114Q96M63 670 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC40A1Q9NP59 571 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 CNOT8Q9UFF9 292 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 GTF3C4Q9UKN8 822 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 A6NNZ2 444 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MIF4GDA9UHW6 222 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 DNM1LO00429 736 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 DLATP10515 647 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 ITGA4P13612 1032 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 ECHS1P30084 290 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TRPC1P48995 793 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MAPK6Q16659 721 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CLEC16AQ2KHT3 1053 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC47A2Q86VL8 602 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 ZBTB45Q96K62 511 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 AVENQ9NQS1 362 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 UVRAGQ9P2Y5 699 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 AMFRQ9UKV5 643 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 COG5Q9UP83 839 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC15A5A6NIM6 579 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CCDC188H7C350 402 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 FTLP02792 175 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 LGALS2P05162 132 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MAPK4P31152 587 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MBTD1Q05BQ5 628 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MPZL3Q6UWV2 235 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TRIM72Q6ZMU5 477 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CCDC121Q6ZUS5 278 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CD302Q8IX05 232 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 MREGQ8N565 214 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 B4GALNT2Q8NHY0 566 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM81AQ8TBF8 368 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 COPS5Q92905 334 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.3□□□□□ -0.441e-8■■■■□ 20.2
SNRNP200-208ENST00000497539 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 CARD9Q9H257 536 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TRPV5Q9NQA5 729 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 BATF3Q9NR55 127 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 TNFSF13BQ9Y275 285 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 PCDHB2Q9Y5E7 798 aa12.3□□□□□ -0.44
SNRNP200-208ENST00000497539 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 GOLGA6L7A0A1B0GV03 622 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 PGRMC1O00264 195 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CLDN3O15551 220 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 SNAI1O95863 264 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CLTAP09496 248 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 MYBL1P10243 752 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 HSPA9P38646 679 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 PIK3CAP42336 1068 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 ZNF132P52740 706 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 TNNC1P63316 161 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 ZNF844Q08AG5 666 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CUL2Q13617 745 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 ACAD10Q6JQN1 1059 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 GPR142Q7Z601 462 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 MDM1Q8TC05 714 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 TRIM11Q96F44 468 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 AMACRQ9UHK6 382 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 H0YGN5 161 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 DAPK3O43293 454 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CAPN15O75808 1086 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CYP1A1P04798 512 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 UNGP13051 313 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CTNNA2P26232 953 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 GJA8P48165 433 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 ACOT2P49753 483 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CLNS1AP54105 237 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 PSMC1P62191 440 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 C6orf89Q6UWU4 347 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms