RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF606Q8WXB4 792 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 RABGGTAQ92696 567 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF653Q96CK0 615 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 CTTNBP2NLQ9P2B4 639 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 AMFRQ9UKV5 643 aa12.26□□□□□ -0.45
HDLBP-245ENST00000494862 UBQLN1Q9UMX0 589 aaKnown RBP12.26□□□□□ -0.45
HDLBP-245ENST00000494862 GPR182O15218 404 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF185O15231 689 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 LSM8O95777 96 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CD4P01730 458 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PAEPP09466 180 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CTSHP09668 335 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CYP3A5P20815 502 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 GRK4P32298 578 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 NSFP46459 744 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 TNNC1P63316 161 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 NOMO3P69849 1222 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 TEX35Q5T0J7 233 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 NAA35Q5VZE5 725 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 LHX8Q68G74 356 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PEX26Q7Z412 305 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 DAAM2Q86T65 1068 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 NT5DC3Q86UY8 548 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PHF13Q86YI8 300 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 TMEM130Q8N3G9 435 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 COG1Q8WTW3 980 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CYFIP2Q96F07 1278 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PBKQ96KB5 322 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CAPZA3Q96KX2 299 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 MMS19Q96T76 1030 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 SDCBP2Q9H190 292 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 CNOT8Q9UFF9 292 aaKnown RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PARP2Q9UGN5 583 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 COG5Q9UP83 839 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 HES2Q9Y543 173 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 IPPQ9Y573 584 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
HDLBP-245ENST00000494862 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-245ENST00000494862 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 CAND2O75155 1236 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 CILPO75339 1184 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 AKAP5P24588 427 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 THPOP40225 353 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 PAFAH1B1P43034 410 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 RAP1GAPP47736 663 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 CDH8P55286 799 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 ITIH3Q06033 890 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 TRIM71Q2Q1W2 868 aaKnown RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 LIN9Q5TKA1 542 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 C9orf57Q5W0N0 161 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 HACE1Q8IYU2 909 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 GPR161Q8N6U8 529 aaKnown RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF564Q8TBZ8 553 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-245ENST00000494862 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 CPA5Q8WXQ8 436 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 RPS6KC1Q96S38 1066 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF518BQ9C0D4 1074 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 CXCL16Q9H2A7 254 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 ERVK-5Q9HDB9 667 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 TUBGCP4Q9UGJ1 667 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 PCDHGC3Q9UN70 934 aa12.24□□□□□ -0.45
HDLBP-245ENST00000494862 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 MED7O43513 233 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 CFHP08603 1231 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 ATF7P17544 494 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 CDH5P33151 784 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 RAD23BP54727 409 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 INCA1Q0VD86 236 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 CFAP221Q4G0U5 840 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 FBXO47Q5MNV8 452 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 MON1BQ7L1V2 547 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 PASD1Q8IV76 773 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms