RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SNRNP27Q8WVK2 155 aaKnown RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 ABHD8Q96I13 439 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 HIC2Q96JB3 615 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PRMT6Q96LA8 375 aaPredicted RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 HSD17B14Q9BPX1 270 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 KIFC3Q9BVG8 833 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TEKT3Q9BXF9 490 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 R3HDM2Q9Y2K5 976 aaKnown RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 SORBS3O60504 671 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 SPAG7O75391 227 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 ZBTB48P10074 688 aaPredicted RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 RARGP13631 454 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 ATP5DP30049 168 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 MAPK4P31152 587 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 MOXD1Q6UVY6 613 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TTC8Q8TAM2 541 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 DNAJC9Q8WXX5 260 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 IFT43Q96FT9 208 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 GPR88Q9GZN0 384 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 MYLK2Q9H1R3 596 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 RNPEPL1Q9HAU8 725 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TMED5Q9Y3A6 229 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 RREB1Q92766 1687 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PFASO15067 1338 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 ENTPD5O75356 428 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TROVE2P10155 538 aaKnown RBP eCLIP10.74□□□□□ -0.69
BRD9-209ENST00000490814 HSPA6P17066 643 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 STIP1P31948 543 aaKnown RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 DNAJC3Q13217 504 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 CEP55Q53EZ4 464 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 BTNL9Q6UXG8 535 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PRUNE1Q86TP1 453 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 ECHDC2Q86YB7 292 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 LRRC37BQ96QE4 947 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PI4K2AQ9BTU6 479 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 MKNK1Q9BUB5 465 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 PLVAPQ9BX97 442 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TOPORSQ9NS56 1045 aaPredicted RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 ITGB1BP2Q9UKP3 347 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 SLX4Q8IY92 1834 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
BRD9-209ENST00000490814 UNC5CO95185 931 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 ATF2P15336 505 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 EPHB2P29323 1055 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 CHKAP35790 457 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 PTGIRP43119 386 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 TMED2Q15363 201 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 SPDYCQ5MJ68 293 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 KAZNQ674X7 775 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 TMEM53Q6P2H8 277 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 ARHGEF18Q6ZSZ5 1173 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 CKAP2Q8WWK9 683 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 FAM192AQ9GZU8 254 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 TUFT1Q9NNX1 390 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 FBXO28Q9NVF7 368 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 KLHL11Q9NVR0 708 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
BRD9-209ENST00000490814 HSPBP1Q9NZL4 362 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 ANAPC5Q9UJX4 755 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 CROTQ9UKG9 612 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 DYTNA2CJ06 578 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 POC1B-GALNT4F8VUJ3 575 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 PEX5P50542 639 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 ERFP50548 548 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 LMBRD2Q68DH5 695 aaPredicted RBP10.73□□□□□ -0.69
BRD9-209ENST00000490814 RSBN1LQ6PCB5 846 aaPredicted RBP10.73□□□□□ -0.69
BRD9-209ENST00000490814 CBWD2Q8IUF1 395 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 PASD1Q8IV76 773 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 XXYLT1Q8NBI6 393 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 STK32AQ8WU08 396 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 MBOAT7Q96N66 472 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 CCDC134Q9H6E4 229 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■■■■■ 32.6
BRD9-209ENST00000490814 CHST7Q9NS84 486 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 ZNF180Q9UJW8 692 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
BRD9-209ENST00000490814 SLC4A7Q9Y6M7 1214 aa10.73□□□□□ -0.69
BRD9-209ENST00000490814 O00370 1275 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 GAS8O95995 478 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 LDHAP00338 332 aaKnown RBP10.72□□□□□ -0.69
BRD9-209ENST00000490814 MYCLP12524 364 aaPredicted RBP10.72□□□□□ -0.69
BRD9-209ENST00000490814 JAG1P78504 1218 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 MPP2Q14168 576 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 CLUL1Q15846 466 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 CLPPQ16740 277 aaPredicted RBP10.72□□□□□ -0.69
BRD9-209ENST00000490814 ANGEL2Q5VTE6 544 aaKnown RBP10.72□□□□□ -0.69
BRD9-209ENST00000490814 IRGCQ6NXR0 463 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 VSTM1Q6UX27 236 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 PTPRN2Q92932 1015 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
BRD9-209ENST00000490814 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms