RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 SPATA6Q9NWH7 488 aaPredicted RBP6.15□□□□□ -1.42
MACF1-221ENST00000487656 FBXO4Q9UKT5 387 aa6.15□□□□□ -1.42
MACF1-221ENST00000487656 USP20Q9Y2K6 914 aa6.15□□□□□ -1.42
MACF1-221ENST00000487656 PCDHGC4Q9Y5F7 938 aa6.15□□□□□ -1.42
MACF1-221ENST00000487656 NUMBLQ9Y6R0 609 aa6.15□□□□□ -1.42
MACF1-221ENST00000487656 LRRIQ4A6NIV6 560 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 FAM170BA6NMN3 283 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 F8W810 466 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 N4BP3O15049 544 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 TRAPPC3O43617 180 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 NEFLP07196 543 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 C8AP07357 584 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 GLRA2P23416 452 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 HOXA9P31269 272 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 CAPSQ13938 189 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 UBXN2BQ14CS0 331 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 MLF2Q15773 248 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 PSMD5Q16401 504 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 ZBTB41Q5SVQ8 909 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 PARM1Q6UWI2 310 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 APBB1IPQ7Z5R6 666 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 SKAP1Q86WV1 359 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 ZBTB8OSQ8IWT0 167 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 LNX1Q8TBB1 728 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 RABGGTAQ92696 567 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 FGF13Q92913 245 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 FGF14Q92915 247 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 AIFM3Q96NN9 605 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 HSD17B14Q9BPX1 270 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 CLSTN3Q9BQT9 956 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 ADPGKQ9BRR6 497 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 FOXQ1Q9C009 403 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 TTC12Q9H892 705 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 XPNPEP1Q9NQW7 623 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 PRMT7Q9NVM4 692 aaPredicted RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 DLGAP2Q9P1A6 1054 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 NCDNQ9UBB6 729 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 FBXW11Q9UKB1 542 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 KCNH3Q9ULD8 1083 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 MRPS17Q9Y2R5 130 aaKnown RBP6.14□□□□□ -1.43
MACF1-221ENST00000487656 RALGAPA1Q6GYQ0 2036 aa6.14□□□□□ -1.43
MACF1-221ENST00000487656 ZNF292O60281 2723 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 CASTOR2A6NHX0 329 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 KHNYNO15037 678 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 CCL16O15467 120 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 B4GALT5O43286 388 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 POU2F2P09086 479 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 FAM157BP0CG42 384 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 ATP2B1P20020 1258 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 OR1D2P34982 312 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 KRT2P35908 639 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 TXKP42681 527 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 RBM25P49756 843 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 RARRES1P49788 294 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 CSTF1Q05048 431 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 PRPF4BQ13523 1007 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 RAB33AQ14088 237 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 PPP2R5DQ14738 602 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 ANKRD1Q15327 319 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 CALCRLQ16602 461 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 MAPK6Q16659 721 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 FAM187BQ17R55 369 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 RSPO4Q2I0M5 234 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 PABPC1LQ4VXU2 614 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 RTP2Q5QGT7 225 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 MAEAQ7L5Y9 396 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 CDR2LQ86X02 465 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 DCLK2Q8N568 766 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 SUMF1Q8NBK3 374 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 MCPH1Q8NEM0 835 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 ST13P5Q8NFI4 369 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 ASAP3Q8TDY4 903 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 HASPINQ8TF76 798 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 NACC1Q96RE7 527 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 RPP25Q9BUL9 199 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 DDX23Q9BUQ8 820 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 NIF3L1Q9GZT8 377 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 POLR3FQ9H1D9 316 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 C2orf40Q9H1Z8 148 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 FZD8Q9H461 694 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 CUEDC1Q9NWM3 386 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 DLL3Q9NYJ7 618 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 GDE1Q9NZC3 331 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 ORC3Q9UBD5 711 aaPredicted RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 MRPS23Q9Y3D9 190 aaKnown RBP6.13□□□□□ -1.43
MACF1-221ENST00000487656 PCDHGA2Q9Y5H1 932 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 STK36Q9NRP7 1315 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 PATJQ8NI35 1801 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 OTOGLQ3ZCN5 2332 aa6.13□□□□□ -1.43
MACF1-221ENST00000487656 VPS13AQ96RL7 3174 aa6.12□□□□□ -1.43
MACF1-221ENST00000487656 MED19A0JLT2 244 aaPredicted RBP6.12□□□□□ -1.43
MACF1-221ENST00000487656 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
MACF1-221ENST00000487656 VWA8A3KMH1 1905 aa6.12□□□□□ -1.43
MACF1-221ENST00000487656 PRR5-ARHGAP8B1AHC4 643 aa6.12□□□□□ -1.43
MACF1-221ENST00000487656 ACKR2O00590 384 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms