RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CCND1P24385 295 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RGS2P41220 211 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SULT1E1P49888 294 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PKN2Q16513 984 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SV2CQ496J9 727 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 BTNL9Q6UXG8 535 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 DCP1BQ8IZD4 617 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PIH1D3Q9NQM4 214 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ADCK2Q7Z695 626 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RBM15Q96T37 977 aaKnown RBP eCLIP9.97□□□□□ -0.812e-9■■■□□ 16.9
VEGFA-212ENST00000480614 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 H0YC42 278 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 MLNP12872 115 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 UNC5CLQ8IV45 518 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RAET1EQ8TD07 263 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 STN1Q9H668 368 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ITIH6Q6UXX5 1313 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 HIST2H2ACQ16777 129 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 HIST2H2AA3Q6FI13 130 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ARL8AQ96BM9 186 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 DTNAQ9Y4J8 743 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KIAA1210Q9ULL0 1709 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RANBP1P43487 201 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 FNTAP49354 379 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF200P98182 395 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 TWF1Q12792 350 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 IYDQ6PHW0 289 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ST13P5Q8NFI4 369 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CYFIP2Q96F07 1278 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 DEPDC7Q96QD5 511 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PNPLA7Q6ZV29 1317 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 TBX3O15119 743 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 MUTP22033 750 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 NCF4Q15080 339 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CYTH1Q15438 398 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 QRICH1Q2TAL8 776 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CNDP1Q96KN2 507 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CCT7Q99832 543 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 IGSF9BQ9UPX0 1349 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KDSRQ06136 332 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF677Q86XU0 584 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SNX12Q9UMY4 172 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 RPS6KA4O75676 772 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 YWHABP31946 246 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 STAT5BP51692 787 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 TRIM48Q8IWZ4 208 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ELMO2Q96JJ3 720 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF512Q96ME7 567 aaPredicted RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 TEX13BQ9BXU2 312 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 DDX47Q9H0S4 455 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 NEDD4P46934 1319 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 BRWD1Q9NSI6 2320 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 VCLP18206 1134 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 GUCA1AP43080 201 aaPredicted RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 CLMNQ96JQ2 1002 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SH3GL2Q99962 352 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 PDP2Q9P2J9 529 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 IFNA14P01570 189 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 NECTIN1Q15223 517 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SH3GL1Q99961 368 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 MUC3BQ9H195 1237 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 CD274Q9NZQ7 290 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ENOPH1Q9UHY7 261 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 MYH14Q7Z406 1995 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 ERBB3P21860 1342 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SNRPAP09012 282 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SOX6P35712 828 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 PTRHD1Q6GMV3 140 aaKnown RBP9.96□□□□□ -0.81
VEGFA-212ENST00000480614 HAUS6Q7Z4H7 955 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 PIGBQ92521 554 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 SLC30A1Q9Y6M5 507 aa9.96□□□□□ -0.81
VEGFA-212ENST00000480614 CPDO75976 1380 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 AKAP10O43572 662 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 RASSF9O75901 435 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 SOAT2O75908 522 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 ANXA9O76027 345 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 DYRK3O43781 588 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 FMR1NBQ8N0W7 255 aaPredicted RBP9.96□□□□□ -0.82
VEGFA-212ENST00000480614 CCDC126Q96EE4 140 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 CDK5RAP1Q96SZ6 601 aaKnown RBP9.96□□□□□ -0.82
VEGFA-212ENST00000480614 P4HA2O15460 535 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 RRM2P31350 389 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 PNPLA4P41247 253 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 DCDC2Q9UHG0 476 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 SASH1O94885 1247 aa9.96□□□□□ -0.82
VEGFA-212ENST00000480614 LRRC74AQ0VAA2 488 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms