RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 PCDHB8Q9UN66 801 aa22.15■■□□□ 1.14
HDAC11-217ENST00000475818 TNFSF13BQ9Y275 285 aa22.15■■□□□ 1.14
HDAC11-217ENST00000475818 TIMM13Q9Y5L4 95 aaPredicted RBP22.15■■□□□ 1.14
HDAC11-217ENST00000475818 BCLAF3A2AJT9 711 aaKnown RBP22.14■■□□□ 1.13
HDAC11-217ENST00000475818 ARHGEF35A5YM69 484 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 WNT7AO00755 349 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 RNF40O75150 1001 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 RHOBTB1O94844 696 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 CYP11B2P19099 503 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 MARCKSP29966 332 aaPredicted RBP22.14■■□□□ 1.13
HDAC11-217ENST00000475818 RPL9P32969 192 aaKnown RBP22.14■■□□□ 1.13
HDAC11-217ENST00000475818 EFNA5P52803 228 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 PLCB2Q00722 1185 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 TMEM130Q8N3G9 435 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 SLC27A5Q9Y2P5 690 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 TRIP11Q15643 1979 aa22.14■■□□□ 1.13
HDAC11-217ENST00000475818 NEMFO60524 1076 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 SOAT2O75908 522 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 EGFP01133 1207 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 GABRR2P28476 465 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 ALDH1A3P47895 512 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 CYP4F8P98187 520 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 ARHGAP15Q53QZ3 475 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 TMEM196Q5HYL7 178 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 CAMKK1Q8N5S9 505 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 BEST2Q8NFU1 509 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 IFT74Q96LB3 600 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 NACC1Q96RE7 527 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 TUFT1Q9NNX1 390 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 TMEM9BQ9NQ34 198 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 OBP2AQ9NY56 170 aa22.13■■□□□ 1.13
HDAC11-217ENST00000475818 HARSP12081 509 aaKnown RBP22.12■■□□□ 1.13
HDAC11-217ENST00000475818 CEACAM1P13688 526 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 KCNE1P15382 129 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 GBP1P32455 592 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 KRT2P35908 639 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 MCM2P49736 904 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 YWHAHQ04917 246 aaPredicted RBP22.12■■□□□ 1.13
HDAC11-217ENST00000475818 UAP1L1Q3KQV9 507 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 DNAJB7Q7Z6W7 309 aaPredicted RBP22.12■■□□□ 1.13
HDAC11-217ENST00000475818 DEFB124Q8NES8 71 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 ACAP3Q96P50 834 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 GKN1Q9NS71 199 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 THG1LQ9NWX6 298 aaKnown RBP22.12■■□□□ 1.13
HDAC11-217ENST00000475818 INVSQ9Y283 1065 aa22.12■■□□□ 1.13
HDAC11-217ENST00000475818 K7ERI5 159 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 MEFVO15553 781 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-217ENST00000475818 HYAL3O43820 417 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-217ENST00000475818 CDKL5O76039 1030 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 CSRP1P21291 193 aaKnown RBP22.11■■□□□ 1.13
HDAC11-217ENST00000475818 PTPAQ15257 358 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 TTC9BQ8N6N2 239 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 TNFRSF25Q93038 417 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 CHFRQ96EP1 664 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 MTMR9Q96QG7 549 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 ACO2Q99798 780 aaKnown RBP22.11■■□□□ 1.13
HDAC11-217ENST00000475818 ZSWIM6Q9HCJ5 1215 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 CNTN3Q9P232 1028 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 TUBGCP4Q9UGJ1 667 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
HDAC11-217ENST00000475818 STK36Q9NRP7 1315 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 PATE3B3GLJ2 98 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 KHNYNO15037 678 aaKnown RBP22.1■■□□□ 1.13
HDAC11-217ENST00000475818 SCRN1Q12765 414 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 TRIM68Q6AZZ1 485 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 ATAD1Q8NBU5 361 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 POLR3CQ9BUI4 534 aaPredicted RBP22.1■■□□□ 1.13
HDAC11-217ENST00000475818 TMEM60Q9H2L4 133 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 FBRSL1Q9HCM7 1045 aaKnown RBP22.1■■□□□ 1.13
HDAC11-217ENST00000475818 HPS4Q9NQG7 708 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 CYP46A1Q9Y6A2 500 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 AKAP13Q12802 2813 aa22.1■■□□□ 1.13
HDAC11-217ENST00000475818 KIF26AQ9ULI4 1882 aaPredicted RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 EML5Q05BV3 1969 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 OTOL1A6NHN0 477 aaPredicted RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 CDX4O14627 284 aaPredicted RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 U2AF2P26368 475 aaKnown RBP eCLIP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 CDR1P51861 262 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 KARSQ15046 597 aaKnown RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 NAIF1Q69YI7 327 aaPredicted RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 CENPPQ6IPU0 288 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 PSMG2Q969U7 264 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 TCHPQ9BT92 498 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 TARS2Q9BW92 718 aaKnown RBP22.09■■□□□ 1.13
HDAC11-217ENST00000475818 EBF3Q9H4W6 596 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 TASP1Q9H6P5 420 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 PTPRHQ9HD43 1115 aa22.09■■□□□ 1.13
HDAC11-217ENST00000475818 CCDC169A6NNP5 214 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 TAF4O00268 1085 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 TRDMT1O14717 391 aaKnown RBP22.08■■□□□ 1.13
HDAC11-217ENST00000475818 OAZ2O95190 189 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 APBB3O95704 486 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 FGF19O95750 216 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 RUNX3Q13761 415 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 SEZ6Q53EL9 994 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 RPLP0P6Q8NHW5 317 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 LPIN3Q9BQK8 851 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 MRPL4Q9BYD3 311 aaKnown RBP22.08■■□□□ 1.13
HDAC11-217ENST00000475818 BRMS1Q9HCU9 246 aa22.08■■□□□ 1.13
HDAC11-217ENST00000475818 KLK13Q9UKR3 277 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms