RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 MFSD10Q14728 455 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 KAT2BQ92831 832 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 ADAMTS10Q9H324 1103 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 VPS18Q9P253 973 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 MTUS1Q9ULD2 1270 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 PROSCO94903 275 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 CYP2C9P11712 490 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 ATICP31939 592 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 GGCXP38435 758 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 RGS2P41220 211 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 SLC13A5Q86YT5 568 aaPredicted RBP16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 TSEN2Q8NCE0 465 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 TFAP2BQ92481 460 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF518BQ9C0D4 1074 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 RAB17Q9H0T7 212 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 TLR3O15455 904 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 PHF2O75151 1096 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 SYF2O95926 243 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CALB1P05937 261 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CD19P15391 556 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CHRNA3P32297 505 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CPT1AP50416 773 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CDH8P55286 799 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 DCAF4L1Q3SXM0 396 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 CATSPER4Q7RTX7 472 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 APBB1IPQ7Z5R6 666 aaPredicted RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 FEZF2Q8TBJ5 459 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 USP6NLQ92738 828 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 PCDHGC3Q9UN70 934 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 BHMG1C9JSJ3 638 aaPredicted RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 MED7O43513 233 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 HSF2BPO75031 334 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 P4HA1P13674 534 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 POLR2BP30876 1174 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 GRM5P41594 1212 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 ALS2CLQ60I27 953 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 PRELID2Q8N945 189 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 AGAP1Q9UPQ3 857 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
RPUSD3-215ENST00000475470 FAM187AA6NFU0 413 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 AGPSO00116 658 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 DAPK3O43293 454 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 GPR32O75388 356 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 NPTXRO95502 500 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 MYL3P08590 195 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 EIF4BP23588 611 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 GYS2P54840 703 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 INHBEP58166 350 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 KCTD19Q17RG1 926 aaPredicted RBP16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 CD302Q8IX05 232 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 RUFY1Q96T51 708 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 OSMRQ99650 979 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 TRIM51Q9BSJ1 452 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 DPP3Q9NY33 737 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
RPUSD3-215ENST00000475470 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 TNPO2O14787 897 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 PSEN2P49810 448 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 RBP5P82980 135 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 RIN2Q8WYP3 895 aaPredicted RBP16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 C18orf8Q96DM3 657 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 APBA2Q99767 749 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 TRIM31Q9BZY9 425 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SDCBP2Q9H190 292 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 DPH5Q9H2P9 285 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 VRTNQ9H8Y1 702 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 CDHR5Q9HBB8 845 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 TCRBV7S2A1N4TA0A589 114 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 GJB6O95452 261 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 PAEPP09466 180 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 ECHS1P30084 290 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 HOXA11P31270 313 aaPredicted RBP16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SSR1P43307 286 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms