RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 HECTD1Q9ULT8 2610 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 ZNF462Q96JM2 2506 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 A0A1B0GUA9 196 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 K7ELQ4 463 aaPredicted RBP15.42■□□□□ 0.06
ATG9A-220ENST00000475339 RNF40O75150 1001 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 MCM7P33993 719 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 TWF1Q12792 350 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 CUL4AQ13619 759 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 ARHGAP29Q52LW3 1261 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
ATG9A-220ENST00000475339 PMS2CLQ68D20 193 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 CD300LGQ6UXG3 332 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 CYP2U1Q7Z449 544 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 HAUS6Q7Z4H7 955 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 PIGKQ92643 395 aa15.42■□□□□ 0.06
ATG9A-220ENST00000475339 WRAP73Q9P2S5 460 aaPredicted RBP15.42■□□□□ 0.06
ATG9A-220ENST00000475339 TENM4Q6N022 2769 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 A0A1W2PRU2 124 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 EML1O00423 815 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 PLA2G2AP14555 144 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 PDCP20941 246 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 BRCC3P46736 316 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 QARSP47897 775 aaKnown RBP15.41■□□□□ 0.06
ATG9A-220ENST00000475339 TRAPPC10P48553 1259 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 GRSF1Q12849 480 aaKnown RBP eCLIP15.41■□□□□ 0.061e-8■■□□□ 14
ATG9A-220ENST00000475339 SEMA3BQ13214 749 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 TMEM196Q5HYL7 178 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 TTC38Q5R3I4 469 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 STXBP5Q5T5C0 1151 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 NCAPH2Q6IBW4 605 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 IFNLR1Q8IU57 520 aaPredicted RBP15.41■□□□□ 0.06
ATG9A-220ENST00000475339 LURAP1LQ8IV03 231 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 LEMD2Q8NC56 503 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 CRELD1Q96HD1 420 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 SCUBE2Q9NQ36 999 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 VAV3Q9UKW4 847 aa15.41■□□□□ 0.06
ATG9A-220ENST00000475339 KALRNO60229 2985 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 RECQL4O94761 1208 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 APBB3O95704 486 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 EGFP01133 1207 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 HSP90AA1P07900 732 aaKnown RBP15.4■□□□□ 0.06
ATG9A-220ENST00000475339 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.065e-8■■■■■ 34.6
ATG9A-220ENST00000475339 CLCNKBP51801 687 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
ATG9A-220ENST00000475339 LMAN2Q12907 356 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 ORC2Q13416 577 aaPredicted RBP15.4■□□□□ 0.06
ATG9A-220ENST00000475339 TFDP1Q14186 410 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 MXD4Q14582 209 aaPredicted RBP15.4■□□□□ 0.06
ATG9A-220ENST00000475339 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 TRIM61Q5EBN2 209 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 HAS1Q92839 578 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 EBF1Q9UH73 591 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
ATG9A-220ENST00000475339 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 DPYSL4O14531 572 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 BCKDHBP21953 392 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 TXKP42681 527 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 DHPSP49366 369 aaPredicted RBP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 DGKEP52429 567 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 CAPSQ13938 189 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 ZNF174Q15697 407 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 ITPRIPL2Q3MIP1 535 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 ASAP3Q8TDY4 903 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 SNX21Q969T3 373 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 CHFRQ96EP1 664 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 MTRQ99707 1265 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 FBRSL1Q9HCM7 1045 aaKnown RBP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 XPNPEP1Q9NQW7 623 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 EVLQ9UI08 416 aaPredicted RBP15.39■□□□□ 0.05
ATG9A-220ENST00000475339 PCDHA12Q9UN75 941 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 SPTA1P02549 2419 aa15.39■□□□□ 0.05
ATG9A-220ENST00000475339 KIF26AQ9ULI4 1882 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-220ENST00000475339 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 WNT7AO00755 349 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 ZBTB39O15060 712 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 TRAPPC3O43617 180 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 OR52Z1P0C646 297 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 ENGP17813 658 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 YWHABP31946 246 aaKnown RBP15.38■□□□□ 0.05
ATG9A-220ENST00000475339 POU5F1BQ06416 359 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 UPP1Q16831 310 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 CCNI2Q6ZMN8 369 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-220ENST00000475339 SLC39A7Q92504 469 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 LRRC3Q9BY71 257 aa15.38■□□□□ 0.05
ATG9A-220ENST00000475339 TTC12Q9H892 705 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-220ENST00000475339 MBD1Q9UIS9 605 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-220ENST00000475339 TRDMT1O14717 391 aaKnown RBP15.37■□□□□ 0.05
ATG9A-220ENST00000475339 P4HBP07237 508 aaKnown RBP15.37■□□□□ 0.05
ATG9A-220ENST00000475339 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms