RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 CT47A1Q5JQC4 288 aaPredicted RBP7.54□□□□□ -1.2
CLDN4-204ENST00000466411 NT5DC1Q5TFE4 455 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 PLPP4Q5VZY2 271 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 DESI1Q6ICB0 168 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 FOXR2Q6PJQ5 311 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 NYAP1Q6ZVC0 841 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 SFR1Q86XK3 245 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 SLC44A3Q8N4M1 653 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 RSAD2Q8WXG1 361 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 ZBTB10Q96DT7 871 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 ACO2Q99798 780 aaKnown RBP7.54□□□□□ -1.2
CLDN4-204ENST00000466411 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 DDX23Q9BUQ8 820 aaKnown RBP7.54□□□□□ -1.2
CLDN4-204ENST00000466411 CCDC94Q9BW85 323 aaPredicted RBP7.54□□□□□ -1.2
CLDN4-204ENST00000466411 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 TMEM117Q9H0C3 514 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 GBP3Q9H0R5 595 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 SLC38A7Q9NVC3 462 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 CA14Q9ULX7 337 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 TENM4Q6N022 2769 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 GREB1Q4ZG55 1949 aa7.54□□□□□ -1.2
CLDN4-204ENST00000466411 PDCD11Q14690 1871 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 TICRRQ7Z2Z1 1910 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 BICDL2A1A5D9 508 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PDXKO00764 312 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PSMA7O14818 248 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 INPPL1O15357 1258 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 IL18RAPO95256 599 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 KCNK5O95279 499 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 TOP3BO95985 862 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 RETP07949 1114 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 ITGA4P13612 1032 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PROZP22891 400 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 RPL13P26373 211 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 HOXA11P31270 313 aaPredicted RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 GRM5P41594 1212 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 CSTF1Q05048 431 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 ENPEPQ07075 957 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 MCL1Q07820 350 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 EHHADHQ08426 723 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 DPYDQ12882 1025 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 CUL4BQ13620 913 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 BMS1Q14692 1282 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 ATAT1Q5SQI0 421 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 RARS2Q5T160 578 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 ZNF658Q5TYW1 1059 aaPredicted RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 MRPL10Q7Z7H8 261 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 GUF1Q8N442 669 aaKnown RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 SPATA20Q8TB22 786 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 EPS8L1Q8TE68 723 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 BSNDQ8WZ55 320 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 RPS6KC1Q96S38 1066 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PPP1R16BQ96T49 567 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 MSTO1Q9BUK6 570 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 STRA6Q9BX79 667 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 NUP62CLQ9H1M0 184 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 TMX1Q9H3N1 280 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 GOLPH3LQ9H4A5 285 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PDZD7Q9H5P4 517 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 MINDY3Q9H8M7 445 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 RSAD1Q9HA92 442 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 ANKFY1Q9P2R3 1169 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 GMEB2Q9UKD1 530 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 MTF2Q9Y483 593 aaPredicted RBP7.53□□□□□ -1.2
CLDN4-204ENST00000466411 GPSM3Q9Y4H4 160 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 PCDHB2Q9Y5E7 798 aa7.53□□□□□ -1.2
CLDN4-204ENST00000466411 A0A087WWV3 80 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 NPHP3-ACAD11A0A0J9YXS1 232 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ARHGEF37A1IGU5 675 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 OGTO15294 1046 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 CALUO43852 315 aaPredicted RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 CLTAP09496 248 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 SRFP11831 508 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LAG3P18627 525 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 SPINK2P20155 84 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ABL2P42684 1182 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LRRC63Q05C16 580 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 GRIK3Q13003 919 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 NFIL3Q16649 462 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 KNOP1Q1ED39 458 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LAIR1Q6GTX8 287 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 EPM2AIP1Q7L775 607 aaPredicted RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 OTOP3Q7RTS5 596 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 C12orf56Q8IXR9 622 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 MRPL43Q8N983 215 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 COLGALT1Q8NBJ5 622 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ZNF507Q8TCN5 953 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms