RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PURAQ00577 322 aaKnown RBP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 TMEM132DQ14C87 1099 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 ZNF667Q5HYK9 610 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 PHF13Q86YI8 300 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 TRIM11Q96F44 468 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 C11orf70Q9BRQ4 267 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 TRIM7Q9C029 511 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 VPS18Q9P253 973 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 SCN1AP35498 2009 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 PDCD11Q14690 1871 aaKnown RBP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 SPOPO43791 374 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 FAM153BP0C7A2 387 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 AARSP49588 968 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 PEX5P50542 639 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 PTP4A2Q12974 167 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 PAK2Q13177 524 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 DCAF4L1Q3SXM0 396 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 FAM153CQ494X1 144 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 SDCBP2Q9H190 292 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 CXCL16Q9H2A7 254 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 ADAM22Q9P0K1 906 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 FAM153AQ9UHL3 310 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 ANAPC7Q9UJX3 599 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 GABRQQ9UN88 632 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 GGCXP38435 758 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 PSMC4P43686 418 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 CDH8P55286 799 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 TMEM40Q8WWA1 233 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 RIN2Q8WYP3 895 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 TFAP2BQ92481 460 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 CAVIN3Q969G5 261 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 NAP1L3Q99457 506 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 EIF2AQ9BY44 585 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 WNT8AQ9H1J5 351 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 MED4Q9NPJ6 270 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 FAN1Q9Y2M0 1017 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 C2CD2Q9Y426 696 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 DUSP11O75319 330 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 SYF2O95926 243 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 EIF4BP23588 611 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 POLR2BP30876 1174 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 SLC27A1Q6PCB7 646 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 MMS22LQ6ZRQ5 1243 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 FAM71BQ8TC56 605 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 TRIB2Q92519 343 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 VCPIP1Q96JH7 1222 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 KATNAL1Q9BW62 490 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 CELF4Q9BZC1 486 aaKnown RBP19.43■□□□□ 0.7
COL9A3-205ENST00000466192 SCN10AQ9Y5Y9 1956 aa19.43■□□□□ 0.7
COL9A3-205ENST00000466192 GOLGA6BA6NDN3 693 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 FCGRTP55899 365 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 TSEN2Q8NCE0 465 aaKnown RBP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 SLITRK6Q9H5Y7 841 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 SMYD3Q9H7B4 428 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 VRTNQ9H8Y1 702 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 ERVK-5Q9HDB9 667 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 C17orf102A2RUQ5 167 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 AGPSO00116 658 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 TTI1O43156 1089 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 C6orf222P0C671 652 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 CYBAP13498 195 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 HOXC8P31273 242 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 ATICP31939 592 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 CTNNA1P35221 906 aaKnown RBP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 YWHAEP62258 255 aaKnown RBP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 CYP4F22Q6NT55 531 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 NOTUMQ6P988 496 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 PAXIP1Q6ZW49 1069 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 MAATS1Q7Z4T9 603 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 DDX42Q86XP3 938 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL9A3-205ENST00000466192 CCDC26Q8TAB7 109 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 DPP3Q9NY33 737 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 AGAP1Q9UPQ3 857 aa19.42■□□□□ 0.7
COL9A3-205ENST00000466192 GOLGA6L10A0A0M3HER8 536 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 MMP8P22894 467 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 CTNNA2P26232 953 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 LACTBP83111 547 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-205ENST00000466192 C1QBPQ07021 282 aaKnown RBP19.41■□□□□ 0.7
COL9A3-205ENST00000466192 HLTFQ14527 1009 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL9A3-205ENST00000466192 SNX17Q15036 470 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 LIN9Q5TKA1 542 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 NT5DC4Q86YG4 428 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 KIF12Q96FN5 646 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 HPDLQ96IR7 371 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 FAXDC2Q96IV6 333 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 ADAM21Q9UKJ8 722 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 ITGA11Q9UKX5 1188 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 HES2Q9Y543 173 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 PCDHA3Q9Y5H8 950 aa19.41■□□□□ 0.7
COL9A3-205ENST00000466192 PYGMP11217 842 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 FLT3LGP49771 235 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 RAD23BP54727 409 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 MAMLD1Q13495 774 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 PCBP1Q15365 356 aaKnown RBP eCLIP19.4■□□□□ 0.7
COL9A3-205ENST00000466192 SMYD5Q6GMV2 418 aa19.4■□□□□ 0.7
COL9A3-205ENST00000466192 PLEKHA7Q6IQ23 1121 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms