RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 HLA-DOAP06340 250 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 GCSHP23434 173 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 DDX6P26196 483 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS8-217ENST00000465213 ELLP55199 621 aaPredicted RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 CDC42EP1Q00587 391 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 DACT2Q5SW24 774 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 MIGA2Q7L4E1 593 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 RAVER1Q8IY67 606 aaKnown RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 C1orf131Q8NDD1 294 aaKnown RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 IFI44Q8TCB0 444 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 SNRNP27Q8WVK2 155 aaKnown RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 CAVIN3Q969G5 261 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 TMX3Q96JJ7 454 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 DMRTA2Q96SC8 542 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.27□□□□□ -1.57
VPS8-217ENST00000465213 GSTO2Q9H4Y5 243 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 PCDHB1Q9Y5F3 818 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 A0A1B0GTW7 788 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 UNC119BA6NIH7 251 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 SGTAO43765 313 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 VDRP11473 427 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 ATF3P18847 181 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 SLC6A4P31645 630 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 CXCR5P32302 372 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 TRAPPC10P48553 1259 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 ADKP55263 362 aaKnown RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 OCA2Q04671 838 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 RESTQ13127 1097 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 INO80DQ53TQ3 878 aaPredicted RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 PAPD7Q5XG87 772 aaKnown RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 B3GNTL1Q67FW5 361 aaPredicted RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 ARMC6Q6NXE6 501 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 RSPH3Q86UC2 560 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 MAPKAPK5Q8IW41 473 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 MYO1HQ8N1T3 1032 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 TMEM132CQ8N3T6 1108 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 KAT5Q92993 513 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 MRGPRX4Q96LA9 322 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 ZSWIM1Q9BR11 485 aa5.26□□□□□ -1.57
VPS8-217ENST00000465213 C11orf54Q9H0W9 315 aaPredicted RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.26□□□□□ -1.57
VPS8-217ENST00000465213 KIAA0391O15091 583 aaKnown RBP5.25□□□□□ -1.57
VPS8-217ENST00000465213 SPDEFO95238 335 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 SBK3P0C264 359 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 CKBP12277 381 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 ALAS1P13196 640 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 FGFR4P22455 802 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 CCND1P24385 295 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 ZNF280AP59817 542 aaPredicted RBP5.25□□□□□ -1.57
VPS8-217ENST00000465213 TP53BP2Q13625 1128 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 KCTD2Q14681 263 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 UAP1L1Q3KQV9 507 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 CHPFQ8IZ52 775 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 ASB10Q8WXI3 467 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 LRFN3Q9BTN0 628 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 REXO4Q9GZR2 422 aaKnown RBP5.25□□□□□ -1.57
VPS8-217ENST00000465213 RNPEPQ9H4A4 650 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 CHST12Q9NRB3 414 aa5.25□□□□□ -1.57
VPS8-217ENST00000465213 MAST3O60307 1309 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 E2F8A0AVK6 867 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 CDHR4A6H8M9 788 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 TCERG1O14776 1098 aaKnown RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 GRM6O15303 877 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 C1RP00736 705 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 LDHCP07864 332 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 FAM163BP0C2L3 166 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 MPLP40238 635 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 NOMO3P69849 1222 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 DSC2Q02487 901 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 CREMQ03060 361 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 MCL1Q07820 350 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 MPP3Q13368 585 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 GRAMD1BQ3KR37 738 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 NOMO2Q5JPE7 1267 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 CCDC70Q6NSX1 233 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 FITM2Q8N6M3 262 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 BOLLQ8N9W6 283 aaKnown RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 MYRIPQ8NFW9 859 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 NSUN6Q8TEA1 469 aaKnown RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 MARS2Q96GW9 593 aaKnown RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 CLPTM1LQ96KA5 538 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 RSPH9Q9H1X1 276 aaPredicted RBP5.24□□□□□ -1.57
VPS8-217ENST00000465213 USP25Q9UHP3 1055 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 AATKQ6ZMQ8 1374 aa5.24□□□□□ -1.57
VPS8-217ENST00000465213 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 SCGB1D2O95969 90 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 MYL3P08590 195 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
VPS8-217ENST00000465213 HSD11B2P80365 405 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 NHLH1Q02575 133 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 TLE1Q04724 770 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 SLFN5Q08AF3 891 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 SCAPQ12770 1279 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 RAB39AQ14964 217 aa5.23□□□□□ -1.57
VPS8-217ENST00000465213 C10orf62Q5T681 223 aaPredicted RBP5.23□□□□□ -1.57
VPS8-217ENST00000465213 SMAP1Q8IYB5 467 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms