RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 C11orf70Q9BRQ4 267 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
MSH2-204ENST00000461394 PARD6BQ9BYG5 372 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 CISHQ9NSE2 258 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 SMARCAL1Q9NZC9 954 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 EHD2Q9NZN4 543 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 RNF14Q9UBS8 474 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 ITGA11Q9UKX5 1188 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 TRPV2Q9Y5S1 764 aa7.25□□□□□ -1.25
MSH2-204ENST00000461394 PGRMC1O00264 195 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 PDE2AO00408 941 aaPredicted RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 XPOTO43592 962 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 AP1G2O75843 785 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 MYBL1P10243 752 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 ATF7P17544 494 aaPredicted RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 ACO1P21399 889 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 ATICP31939 592 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 TNNT3P45378 269 aaPredicted RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 CLCN6P51797 869 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 POU5F1Q01860 360 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 NFX1Q12986 1120 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 ARHGEF6Q15052 776 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 BRD3Q15059 726 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 SLC10A6Q3KNW5 377 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 ZFYVE27Q5T4F4 411 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 SEL1L2Q5TEA6 688 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 C11orf63Q6NUN7 778 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 C8orf74Q6P047 294 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 TAF2Q6P1X5 1199 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 MMS22LQ6ZRQ5 1243 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 NT5DC3Q86UY8 548 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 SESTD1Q86VW0 696 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 NT5DC4Q86YG4 428 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 CREG2Q8IUH2 290 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 HACE1Q8IYU2 909 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 C1orf127Q8N9H9 656 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 LRRC57Q8N9N7 239 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 PCSK9Q8NBP7 692 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 NOA1Q8NC60 698 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 MSANTD4Q8NCY6 345 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 DDX1Q92499 740 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 CYFIP2Q96F07 1278 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 CELF4Q9BZC1 486 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 DNAI2Q9GZS0 605 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 UPF3AQ9H1J1 476 aaKnown RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 SMYD3Q9H7B4 428 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 SYNCQ9H7C4 482 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 RNF186Q9NXI6 227 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 ADAM22Q9P0K1 906 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 UVRAGQ9P2Y5 699 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 CHORDC1Q9UHD1 332 aaPredicted RBP7.24□□□□□ -1.25
MSH2-204ENST00000461394 ANAPC7Q9UJX3 599 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 GTF3C4Q9UKN8 822 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 C2CD2Q9Y426 696 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 PCDHGA10Q9Y5H3 936 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 CDY2AQ9Y6F7 541 aa7.24□□□□□ -1.25
MSH2-204ENST00000461394 MIF4GDA9UHW6 222 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 RPS6KA5O75582 802 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 RECQL4O94761 1208 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SLC34A2O95436 690 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 HMGCRP04035 888 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 CYP1A2P05177 515 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 CALB1P05937 261 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ASGR1P07306 291 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 TUBBP07437 444 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ZSCAN20P17040 1043 aaPredicted RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 COMTP21964 271 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 AKAP5P24588 427 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 GJC1P36383 396 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 THPOP40225 353 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ASPAP45381 313 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 APLP1P51693 650 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 CDH8P55286 799 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ORC1Q13415 861 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 KCNA10Q16322 511 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 PTGISQ16647 500 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 LONRF2Q1L5Z9 754 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 MAP9Q49MG5 647 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ODF2Q5BJF6 829 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 GLRA4Q5JXX5 417 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SCARA3Q6AZY7 606 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 GDF6Q6KF10 455 aaPredicted RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 RNF180Q86T96 592 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ERICH1Q86X53 443 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 KLHL7Q8IXQ5 586 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 MCOLN2Q8IZK6 566 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 TMEM130Q8N3G9 435 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 TMEM35BQ8NCS4 154 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 C1orf131Q8NDD1 294 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 SPATA4Q8NEY3 305 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 OLIG1Q8TAK6 271 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 ZNF606Q8WXB4 792 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 BTBD6Q96KE9 485 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 SNX27Q96L92 541 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 HEXIM2Q96MH2 286 aaKnown RBP7.23□□□□□ -1.25
MSH2-204ENST00000461394 ZNF560Q96MR9 790 aa7.23□□□□□ -1.25
MSH2-204ENST00000461394 RPS6KC1Q96S38 1066 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms