RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KRT17Q04695 432 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 CALCOCO2Q13137 446 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 SNX1Q13596 522 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 PTK6Q13882 451 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 EFCAB12Q6NXP0 572 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 CROCCP2Q86T23 111 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 CDR2LQ86X02 465 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 GTF3C2Q8WUA4 911 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TMEM109Q9BVC6 243 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 EPN3Q9H201 632 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 ERAP1Q9NZ08 941 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 BCCIPQ9P287 314 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TP73O15350 636 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 C22orf31O95567 290 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 TNNC2P02585 160 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 EPHX2P34913 555 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ASPAP45381 313 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 OSTNP61366 133 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 PPP2R2AP63151 447 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 PTGISQ16647 500 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF699Q32M78 642 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 SCARA5Q6ZMJ2 495 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ARMC9Q7Z3E5 817 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 CEP120Q8N960 986 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 TMEM35BQ8NCS4 154 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ATG4AQ8WYN0 398 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 PGM2Q96G03 612 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 FAXDC2Q96IV6 333 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ANKRD36BP1Q96IX9 119 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 NOVA2Q9UNW9 492 aaKnown RBP17.7■□□□□ 0.42
CCDC43-202ENST00000457422 TMEM191CA6NGB0 347 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 IL18RAPO95256 599 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 SHBGP04278 402 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 CYP2C8P10632 490 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 RALAP11233 206 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 EIF4BP23588 611 aaKnown RBP17.7■□□□□ 0.42
CCDC43-202ENST00000457422 CCT5P48643 541 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 YWHAEP62258 255 aaKnown RBP17.7■□□□□ 0.42
CCDC43-202ENST00000457422 FAM187BQ17R55 369 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF484Q5JVG2 852 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 RHBDF2Q6PJF5 856 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 MINDY3Q9H8M7 445 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-202ENST00000457422 USTQ9Y2C2 406 aa17.7■□□□□ 0.42
CCDC43-202ENST00000457422 PLXNB2O15031 1838 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 GAS8O95995 478 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 ITIH2P19823 946 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 GJC1P36383 396 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 SNAPC2Q13487 334 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 SLC29A2Q14542 456 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 CCNG2Q16589 344 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 GJC2Q5T442 439 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-202ENST00000457422 LDLRAD1Q5T700 205 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 IFNLR1Q8IU57 520 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-202ENST00000457422 CCDC50Q8IVM0 306 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 ATL2Q8NHH9 583 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 CDT1Q9H211 546 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 SEMA4AQ9H3S1 761 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 RNPEPQ9H4A4 650 aa17.69■□□□□ 0.42
CCDC43-202ENST00000457422 EBAG9O00559 213 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 RIPK2O43353 540 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 PAEPP09466 180 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 WEE2P0C1S8 567 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 IVDP26440 423 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 MAGOHP61326 146 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 IGBP1P78318 339 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 TAP1Q03518 808 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 BYSLQ13895 437 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 LRRC38Q5VT99 294 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 LINC01465Q8N7H1 131 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 OSBPL8Q9BZF1 889 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 PNMA3Q9UL41 463 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 R3HDM2Q9Y2K5 976 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 NEU2Q9Y3R4 380 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 NDUFAB1O14561 156 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 CAND2O75155 1236 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 CXCL8P10145 99 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 RPL7AP62424 266 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 CAV1Q03135 178 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 ADCY2Q08462 1091 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 LAMC2Q13753 1193 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 PPP1R15BQ5SWA1 713 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 UBAP2Q5T6F2 1119 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 TRMT10CQ7L0Y3 403 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.428e-6■■□□□ 12.8
CCDC43-202ENST00000457422 SNF8Q96H20 258 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 HEMGNQ9BXL5 484 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 TSPYL1Q9H0U9 437 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
CCDC43-202ENST00000457422 IFT122Q9HBG6 1241 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 ASIC3Q9UHC3 531 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms